FFCP PHASE1:Hg19::chr20:56234717..56234758,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:56234717..56234758,- | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_at_chr20:56234717..56234758,- | |description=CAGE_peak_at_chr20:56234717..56234758,- | ||
Latest revision as of 15:43, 28 July 2015
| Short description: | p@chr20:56234717..56234758, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr20:56234717..56234758, - |
| Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr20:56234717..56234758- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chondroblast | 2.45e-12 | 6 |
| chondrocyte | 2.45e-12 | 6 |
| GAG secreting cell | 1.12e-08 | 9 |
| carbohydrate secreting cell | 1.12e-08 | 9 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| hepatopancreatic ampulla | 4.66e-66 | 1 |
| extrahepatic bile duct | 4.66e-66 | 1 |
| common bile duct | 4.66e-66 | 1 |
| duodenal papilla | 4.66e-66 | 1 |
| duodenum | 4.09e-23 | 2 |
| small intestine | 1.83e-14 | 4 |
| bile duct | 2.74e-12 | 6 |
| digestive system duct | 2.74e-12 | 6 |
| biliary system | 1.21e-08 | 9 |
| biliary tree | 1.21e-08 | 9 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| tubular adenocarcinoma | 7.05e-34 | 2 |
Showing 1 to 1 of 1 entries
