Personal tools

FFCP PHASE1:Hg19::chr20:5826953..5826990,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr20:5826953..5826990,-
|coexpression_cluster_id=C23
|description=CAGE_peak_at_chr20:5826953..5826990,-
|description=CAGE_peak_at_chr20:5826953..5826990,-
|id=chr20:5826953..5826990,-
|id=chr20:5826953..5826990,-
|ontology_enrichment_celltype=CL:0000624!8.34e-36!6;CL:0000791!4.74e-31!18;CL:0000789!4.74e-31!18;CL:0002420!4.74e-31!18;CL:0002419!4.74e-31!18;CL:0000790!4.74e-31!18;CL:0000084!7.53e-22!25;CL:0000827!7.53e-22!25;CL:0000898!9.18e-19!3;CL:0000623!2.65e-18!3;CL:0000825!2.65e-18!3;CL:0000838!1.67e-16!52;CL:0000542!3.83e-16!53;CL:0000051!3.83e-16!53;CL:0000815!5.96e-13!2;CL:0000792!5.96e-13!2;CL:0002677!5.96e-13!2;CL:0002087!8.01e-12!119;CL:0000738!9.01e-11!140;CL:0002031!1.41e-08!124;CL:0000625!1.54e-08!11;CL:0000842!2.11e-08!3;CL:0000037!4.75e-08!172;CL:0000566!4.75e-08!172;CL:0000810!1.55e-07!1;CL:0000895!1.55e-07!1;CL:0002436!1.55e-07!1;CL:0002427!1.55e-07!1;CL:0002428!1.55e-07!1;CL:0002429!1.55e-07!1;CL:0002433!1.55e-07!1;CL:0002431!1.55e-07!1;CL:0002432!1.55e-07!1;CL:0000988!2.13e-07!182
|ontology_enrichment_celltype=CL:0000624!8.34e-36!6;CL:0000791!4.74e-31!18;CL:0000789!4.74e-31!18;CL:0002420!4.74e-31!18;CL:0002419!4.74e-31!18;CL:0000790!4.74e-31!18;CL:0000084!7.53e-22!25;CL:0000827!7.53e-22!25;CL:0000898!9.18e-19!3;CL:0000623!2.65e-18!3;CL:0000825!2.65e-18!3;CL:0000838!1.67e-16!52;CL:0000542!3.83e-16!53;CL:0000051!3.83e-16!53;CL:0000815!5.96e-13!2;CL:0000792!5.96e-13!2;CL:0002677!5.96e-13!2;CL:0002087!8.01e-12!119;CL:0000738!9.01e-11!140;CL:0002031!1.41e-08!124;CL:0000625!1.54e-08!11;CL:0000842!2.11e-08!3;CL:0000037!4.75e-08!172;CL:0000566!4.75e-08!172;CL:0000810!1.55e-07!1;CL:0000895!1.55e-07!1;CL:0002436!1.55e-07!1;CL:0002427!1.55e-07!1;CL:0002428!1.55e-07!1;CL:0002429!1.55e-07!1;CL:0002433!1.55e-07!1;CL:0002431!1.55e-07!1;CL:0002432!1.55e-07!1;CL:0000988!2.13e-07!182
|ontology_enrichment_celltype_v019=CL:0000624;4.09e-70;6!CL:0000791;1.21e-40;18!CL:0000789;1.21e-40;18!CL:0002419;1.21e-40;18!CL:0000898;6.47e-36;3!CL:0000623;6.48e-35;3!CL:0000084;4.47e-29;25!CL:0000815;2.80e-24;2!CL:0000792;2.80e-24;2!CL:0002677;2.80e-24;2!CL:0000542;1.68e-13;53!CL:0000895;1.82e-13;1
|ontology_enrichment_celltype_v019_2=CL:0000624,4.09e-70,6;CL:0000791,1.14e-40,18;CL:0000789,1.14e-40,18;CL:0002420,1.14e-40,18;CL:0002419,1.14e-40,18;CL:0000790,1.14e-40,18;CL:0000898,6.87e-36,3;CL:0000623,5.76e-35,3;CL:0000825,5.76e-35,3;CL:0000084,4.30e-29,25;CL:0000827,4.30e-29,25;CL:0000838,1.23e-25,52;CL:0000542,3.97e-25,53;CL:0000051,3.97e-25,53;CL:0000815,2.97e-24,2;CL:0000792,2.97e-24,2;CL:0002677,2.97e-24,2;CL:0000810,1.82e-13,1;CL:0000895,1.82e-13,1;CL:0002436,1.82e-13,1;CL:0002427,1.82e-13,1;CL:0002428,1.82e-13,1;CL:0002429,1.82e-13,1;CL:0002433,1.82e-13,1;CL:0002431,1.82e-13,1;CL:0002432,1.82e-13,1;CL:0002087,1.03e-10,115;CL:0002031,3.28e-10,120;CL:0000738,7.64e-09,136;CL:0000893,2.28e-07,2;CL:0002489,2.28e-07,2;CL:0000809,2.28e-07,2;CL:0000808,2.28e-07,2;CL:0000894,2.28e-07,2;CL:0000806,2.28e-07,2;CL:0000807,2.28e-07,2;CL:0000805,2.28e-07,2;CL:0002425,2.28e-07,2;CL:0002032,3.03e-07,161;CL:0000837,3.03e-07,161;CL:0000037,7.00e-07,168
|ontology_enrichment_development_v019=CL:0000790;1.21e-40;18!CL:0000051;1.68e-13;53!CL:0002427;1.82e-13;1!CL:0002425;2.28e-07;2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26181034478099,5.50215067848831,12.130488440971,0,4.23698946623668,10.4158517261641,0,0.111410456885174,5.00830042707223,7.75368631042674,13.2693893244858,0,0,0,0,0,0.444859689486181,1.07016331235885,0,0,15.3288197440768,20.6176467289578,11.8919255249166,0,0,0,0.150575119077773,0,0,0,0,1.41124720257313,0.802320587350522,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,2.37190332345469,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26181034478099,5.50215067848831,12.130488440971,0,4.23698946623668,10.4158517261641,0,0.111410456885174,5.00830042707223,7.75368631042674,13.2693893244858,0,0,0,0,0,0.444859689486181,1.07016331235885,0,0,15.3288197440768,20.6176467289578,11.8919255249166,0,0,0,0.150575119077773,0,0,0,0,1.41124720257313,0.802320587350522,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,2.37190332345469,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr20:5826953..5826990,-
|short_description=p@chr20:5826953..5826990,-
}}
}}

Latest revision as of 15:56, 28 July 2015

Short description:p@chr20:5826953..5826990, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr20:5826953..5826990, -
Coexpression cluster:C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr20:5826953..5826990,-&oldid=3497219"