FFCP PHASE1:Hg19::chr20:9495383..9495390,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=24141 | |EntrezGene=entrezgene:24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16097 | |HGNC=HGNC:16097 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9UJQ1 | |UniProt=uniprot:Q9UJQ1 | ||
|association_with_transcript=112bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |association_with_transcript=112bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | ||
|cluster_id=chr20:9495383..9495390,+ | |||
|coexpression_cluster_id=C1485 | |coexpression_cluster_id=C1485 | ||
|description=CAGE_peak_14_at_LAMP5_5end | |description=CAGE_peak_14_at_LAMP5_5end |
Revision as of 16:39, 28 July 2015
Short description: | p14@LAMP5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LAMP5_5end |
Coexpression cluster: | C1485_myeloma_putamen_caudate_nucleus_Dendritic_pons_Lymphatic |
Association with transcript: | 112bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | 24141 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p14@LAMP5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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plasmacytoid dendritic cell | 5.41e-54 | 3 |
dendritic cell | 2.61e-15 | 10 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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caudate-putamen | 6.22e-25 | 3 |
dorsal striatum | 6.22e-25 | 3 |
telencephalic nucleus | 1.14e-23 | 7 |
putamen | 1.88e-19 | 1 |
corpus striatum | 5.64e-19 | 4 |
striatum | 5.64e-19 | 4 |
ventral part of telencephalon | 5.64e-19 | 4 |
future corpus striatum | 5.64e-19 | 4 |
basal ganglion | 1.41e-18 | 9 |
neural nucleus | 1.41e-18 | 9 |
Showing 1 to 10 of 44 entries
Ontology term | p-value | n |
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bone marrow cancer | 8.95e-20 | 1 |
myeloma | 8.95e-20 | 1 |
Showing 1 to 2 of 2 entries