FFCP PHASE1:Hg19::chr21:17340298..17340318,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:17340298..17340318,+ | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_at_chr21:17340298..17340318,+ | |description=CAGE_peak_at_chr21:17340298..17340318,+ | ||
|id=chr21:17340298..17340318,+ | |id=chr21:17340298..17340318,+ | ||
|ontology_enrichment_celltype=CL:0000062!3.58e-07!11;CL:0000375!3.58e-07!11;CL:0000335!3.58e-07!11 | |ontology_enrichment_celltype=CL:0000062!3.58e-07!11;CL:0000375!3.58e-07!11;CL:0000335!3.58e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.84e-29;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.23e-24,11;CL:0000375,5.23e-24,11;CL:0000335,5.23e-24,11 | |||
|ontology_enrichment_development_v019=CL:0000335;5.23e-24;11 | |||
|ontology_enrichment_disease=DOID:4468!8.55e-17!2;DOID:3371!2.04e-09!1;DOID:4549!2.04e-09!1;DOID:5861!2.04e-09!1;DOID:6496!2.04e-09!1;DOID:0060060!5.75e-09!1;DOID:0060061!5.75e-09!1;DOID:8691!5.75e-09!1;DOID:5662!6.22e-09!1 | |ontology_enrichment_disease=DOID:4468!8.55e-17!2;DOID:3371!2.04e-09!1;DOID:4549!2.04e-09!1;DOID:5861!2.04e-09!1;DOID:6496!2.04e-09!1;DOID:0060060!5.75e-09!1;DOID:0060061!5.75e-09!1;DOID:8691!5.75e-09!1;DOID:5662!6.22e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.78e-29;1!DOID:4549;1.78e-29;1!DOID:5861;1.78e-29;1!DOID:6496;1.78e-29;1!DOID:4468;2.37e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.78e-29,1;DOID:4549,1.78e-29,1;DOID:5861,1.78e-29,1;DOID:6496,1.78e-29,1;DOID:4468,2.05e-15,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;9.82e-26;18!UBERON:0004765;5.17e-18;26!UBERON:0001434;2.63e-13;36!UBERON:0002418;8.99e-11;3!UBERON:0004755;8.99e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,8.99e-11,3;UBERON:0004755,8.99e-11,3 | |||
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|short_description=p@chr21:17340298..17340318,+ | |short_description=p@chr21:17340298..17340318,+ | ||
}} | }} |
Latest revision as of 16:47, 28 July 2015
Short description: | p@chr21:17340298..17340318, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:17340298..17340318, + |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.23e-24 | 11 |
osteoprogenitor cell | 5.23e-24 | 11 |
mesenchyme condensation cell | 5.23e-24 | 11 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 8.99e-11 | 3 |
skeletal tissue | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.78e-29 | 1 |
extraosseous chondrosarcoma | 1.78e-29 | 1 |
myxoid chondrosarcoma | 1.78e-29 | 1 |
extraskeletal myxoid chondrosarcoma | 1.78e-29 | 1 |
clear cell adenocarcinoma | 2.05e-15 | 2 |