FFCP PHASE1:Hg19::chr21:44592842..44592867,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-453bp_to_CU686889_5end | |association_with_transcript=-453bp_to_CU686889_5end | ||
|cluster_id=chr21:44592842..44592867,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_1_at_CU686889_5end | |description=CAGE_peak_1_at_CU686889_5end | ||
Latest revision as of 18:16, 28 July 2015
| Short description: | p1@CU686889 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CU686889_5end |
| Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
| Association with transcript: | -453bp_to_CU686889_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@CU686889 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| crystallin accumulating cell | 6.60e-50 | 4 |
| vertebrate lens cell | 6.60e-50 | 4 |
| lens epithelial cell | 6.60e-50 | 4 |
| columnar/cuboidal epithelial cell | 2.22e-08 | 27 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| cuboidal epithelium | 6.60e-50 | 4 |
| transparent eye structure | 6.60e-50 | 4 |
| simple cuboidal epithelium | 6.60e-50 | 4 |
| cranial placode | 6.60e-50 | 4 |
| lens of camera-type eye | 6.60e-50 | 4 |
| epithelium of lens | 6.60e-50 | 4 |
| lens placode | 6.60e-50 | 4 |
| lens vesicle | 6.60e-50 | 4 |
| external ectoderm | 1.26e-25 | 8 |
| eye | 4.76e-22 | 21 |
Showing 1 to 10 of 26 entries
