FFCP PHASE1:Hg19::chr22:18561251..18561260,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:18561251..18561260,-
|short_description=p2@CU013074,p2@CU013362
|description=CAGE_peak_2_at_CU013074_5end,CAGE_peak_2_at_CU013362_5end
|association_with_t...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=265bp_to_CU013074,CU013362_5end | |||
|cluster_id=chr22:18561251..18561260,- | |||
|description=CAGE_peak_2_at_CU013074_5end,CAGE_peak_2_at_CU013362_5end | |||
|id=chr22:18561251..18561260,- | |||
|ontology_enrichment_celltype=CL:0000066!2.99e-12!254;CL:0000223!6.18e-11!59;CL:0002076!2.45e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.05e-29;1!CL:0002625;2.05e-29;1!CL:0000216;2.05e-29;1!CL:0001014;1.91e-15;2!CL:0001016;1.91e-15;2!CL:0000244;2.18e-08;4!CL:0000731;2.18e-08;4!CL:0000453;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.78e-29,1;CL:0002625,1.78e-29,1;CL:0000216,1.78e-29,1;CL:0001014,2.05e-15,2;CL:0001016,2.05e-15,2;CL:0000244,1.96e-08,4;CL:0000731,1.96e-08,4;CL:0000453,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.87e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!9.07e-08!54;UBERON:0005911!1.58e-07!82;UBERON:0004119!1.80e-07!169;UBERON:0000925!1.80e-07!169;UBERON:0006595!1.80e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.05e-29;1!UBERON:0001343;2.05e-29;1!UBERON:0004910;2.05e-29;1!UBERON:0004813;2.05e-29;1!UBERON:0004909;1.91e-15;2!UBERON:0006554;3.09e-09;30!UBERON:0001008;3.09e-09;30!UBERON:0005904;2.18e-08;4!UBERON:0000365;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.78e-29,1;UBERON:0001343,1.78e-29,1;UBERON:0004910,1.78e-29,1;UBERON:0005154,1.78e-29,1;UBERON:0005295,1.78e-29,1;UBERON:0004813,1.78e-29,1;UBERON:0005297,1.78e-29,1;UBERON:0005294,1.78e-29,1;UBERON:0010141,1.78e-29,1;UBERON:0005891,1.78e-29,1;UBERON:0004909,1.78e-15,2;UBERON:0005904,2.11e-08,4;UBERON:0000365,5.38e-07,5 | |||
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| ||
|short_description=p2@CU013074,p2@CU013362 | |||
}} | }} |
Latest revision as of 19:02, 28 July 2015
Short description: | p2@CU013074, p2@CU013362 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU013074_5end, CAGE_peak_2_at_CU013362_5end |
Coexpression cluster: | NA |
Association with transcript: | 265bp_to_CU013074, CU013362_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.78e-29 | 1 |
seminiferous tubule epithelial cell | 1.78e-29 | 1 |
Sertoli cell | 1.78e-29 | 1 |
CD1a-positive Langerhans cell | 2.05e-15 | 2 |
immature CD1a-positive Langerhans cell | 2.05e-15 | 2 |
transitional epithelial cell | 1.96e-08 | 4 |
urothelial cell | 1.96e-08 | 4 |
Langerhans cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.78e-29 | 1 |
seminiferous tubule of testis | 1.78e-29 | 1 |
epithelium of male gonad | 1.78e-29 | 1 |
epithelial cord | 1.78e-29 | 1 |
sex cord | 1.78e-29 | 1 |
seminiferous tubule epithelium | 1.78e-29 | 1 |
testis sex cord | 1.78e-29 | 1 |
genital ridge | 1.78e-29 | 1 |
primitive sex cord of indifferent gonad | 1.78e-29 | 1 |
coelomic epithelium | 1.78e-29 | 1 |
epithelium of gonad | 1.78e-15 | 2 |
duct of male reproductive system | 2.11e-08 | 4 |
urothelium | 5.38e-07 | 5 |