FFCP PHASE1:Hg19::chr22:27620510..27620535,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=82bp_to_ENST00000418271_5end | |association_with_transcript=82bp_to_ENST00000418271_5end | ||
|cluster_id=chr22:27620510..27620535,- | |||
|description=CAGE_peak_3_at_ENST00000418271_5end | |description=CAGE_peak_3_at_ENST00000418271_5end | ||
|id=chr22:27620510..27620535,- | |id=chr22:27620510..27620535,- | ||
|ontology_enrichment_celltype=CL:0000055!1.32e-16!180;CL:0000057!1.70e-13!75;CL:0000077!2.64e-10!19;CL:0002620!4.54e-08!23;CL:0000183!2.58e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.32e-16!180;CL:0000057!1.70e-13!75;CL:0000077!2.64e-10!19;CL:0002620!4.54e-08!23;CL:0000183!2.58e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000669;4.81e-11;4!CL:0002577;1.75e-09;3!CL:0002590;1.73e-08;3!CL:0000064;2.18e-08;3!CL:0000067;2.18e-08;3!CL:0005012;2.18e-08;3!CL:0002304;2.18e-08;3!CL:0000349;4.17e-08;19!CL:0000077;9.86e-08;19!CL:0002536;4.73e-07;2!CL:0002549;5.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,9.87e-11,4;CL:0000057,1.31e-10,76;CL:0002577,1.81e-09,3;CL:0002590,1.93e-08,3;CL:0000064,3.56e-08,3;CL:0000067,3.56e-08,3;CL:0005012,3.56e-08,3;CL:0002304,3.56e-08,3;CL:0000349,4.18e-08,19;CL:0000077,9.92e-08,19;CL:0002536,4.76e-07,2;CL:0002549,5.48e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.04e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!3.43e-08!11;UBERON:0006876!3.43e-08!11;UBERON:0000475!1.06e-07!365;UBERON:0007625!3.49e-07!11;UBERON:0005284!5.91e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;4.63e-18;11!UBERON:0005284;8.79e-14;5!UBERON:0000488;1.94e-10;4!UBERON:0007625;2.32e-10;11!UBERON:0001778;2.18e-08;3!UBERON:0001775;2.18e-08;3!UBERON:0001801;6.51e-08;14!UBERON:0001987;3.51e-07;4!UBERON:0005629;5.53e-07;2!UBERON:0005358;5.53e-07;2!UBERON:0001886;5.53e-07;2!UBERON:0004086;5.53e-07;2!UBERON:0005282;5.53e-07;2!UBERON:0005281;5.53e-07;2!UBERON:0002203;5.91e-07;6!UBERON:0001768;5.91e-07;6!UBERON:0002200;5.91e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.08e-17,11;UBERON:0005284,9.76e-14,5;UBERON:0007625,3.05e-10,11;UBERON:0000488,4.93e-10,4;UBERON:0001778,3.56e-08,3;UBERON:0001775,3.56e-08,3;UBERON:0001801,8.01e-08,14;UBERON:0001987,3.60e-07,4;UBERON:0004340,3.60e-07,4;UBERON:0005629,5.48e-07,2;UBERON:0005358,5.48e-07,2;UBERON:0001886,5.48e-07,2;UBERON:0004086,5.48e-07,2;UBERON:0005282,5.48e-07,2;UBERON:0005281,5.48e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,7.20856528029568,6.59417445571134,0,0.331397375727916,0,0,0,0,1.60057375499824,1.83600622119828,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0.361439152384566,0,0,0.795285947051099,0,1.13441780596881,4.43458794925128,1.14185221401064,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.759783069987479,0.926864265692532,2.29469296599051,0,2.80338800071154,0,3.45334567784024,0.311211035399766,0.134710672069688,0,6.05429710579726,4.60940739583999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,1.25572744982203,0.640672166455702,0.847727604638247,1.20036438433761,1.03052529238439,1.28820270022815,1.11670113798954,0.675105328965065,2.04617710838517,1.7670364197088,0.736399189138395,0.161646056818812,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,2.88662684050547,0.231860809950154,1.76113041353732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80327710863402,3.92364061949952,0.80672114403045,1.29271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.710783897485092,0,3.91871190177462,0.871533458600294,2.89921674427965,0,0,0,1.19812427745791,3.44585807502342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0,0.300946099727719,0,0,0,0.553107505625109,0.0868836144680828,2.34961388955289,3.0882908142977,0,0,0,2.42502057157008,16.6435439510497,7.55975733324201,2.48107807818777,0.767309866440312,1.40330047216537,2.56278298511402,0,1.44768529029247,2.96836132889982,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,1.08378575017541,2.00675909541941,0,0,0,0,0,0,0.656029291399411,0,0,0.54941678891006,0.742585499285292,0,0,3.21367859688319,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.255679882248303,0.623224249527161,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,2.60510858551767,2.53103539774981,1.14378116354295,0,0,0.318203247925937,0.78494864019923,0.359744915166629,1.37268514868027,1.06031162111118,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0.430234056612155,0.982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,1.02268682502155,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0,0.683652335082007,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0.451961481561065,0.137041924646751,0,0.0633107959558787,0,2.08412932653988,0,0,0,0,0,0,0,0,0.407712618220842,0.732219924186332,0.101998217636322,1.15580235960608,0,0,0,2.14882720709979,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,1.19730191562487,0,2.3854323049959,0.453248366080503,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,1.55300672151593,0.372578417648301,0,0,0,0,0.470531639396343,0,0,0.597019211547496,0.233713309847224,0,0,0,0,0,0.151230923763239,1.5543720058278,0,0.318593534327405,0,1.24210365501008,0.414706207840855,1.59505028734797,0.521745061811734,3.00515217994437,1.14241563650639,0.406870733204662,0.909243296012797,3.22231671127465,0.464033759878494,0.398095888698616,0.800055529326307,1.03018711554838,3.03074539889327,0,0.770479321629213,4.28883182749851,0,1.13352962756136,0.694567422971502,1.46842022703881,0.895444205407437,0.617602894321944,3.0699766941019,0.176689145945881,1.15748422962549,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0,0,0,0,0,0,2.86203915588077,0,0,0.705351887381368,0,0.321146125482298,0,0,0.205116364240755,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.676892955143315,5.84944699240208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.863710364874486,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0.339854229375634,0,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,1.38652688589425,1.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| ||
|short_description=p3@ENST00000418271 | |short_description=p3@ENST00000418271 | ||
}} | }} |
Latest revision as of 19:50, 28 July 2015
Short description: | p3@ENST00000418271 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000418271_5end |
Coexpression cluster: | NA |
Association with transcript: | 82bp_to_ENST00000418271_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 9.87e-11 | 4 |
fibroblast | 1.31e-10 | 76 |
placental epithelial cell | 1.81e-09 | 3 |
smooth muscle cell of the brain vasculature | 1.93e-08 | 3 |
ciliated cell | 3.56e-08 | 3 |
ciliated epithelial cell | 3.56e-08 | 3 |
multi-ciliated epithelial cell | 3.56e-08 | 3 |
non-pigmented ciliary epithelial cell | 3.56e-08 | 3 |
extraembryonic cell | 4.18e-08 | 19 |
mesothelial cell | 9.92e-08 | 19 |
amniotic epithelial cell | 4.76e-07 | 2 |
fibroblast of choroid plexus | 5.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 1.08e-17 | 11 |
brain vasculature | 9.76e-14 | 5 |
pigment epithelium of eye | 3.05e-10 | 11 |
atypical epithelium | 4.93e-10 | 4 |
ciliary epithelium | 3.56e-08 | 3 |
ciliary body | 3.56e-08 | 3 |
anterior segment of eyeball | 8.01e-08 | 14 |
placenta | 3.60e-07 | 4 |
allantois | 3.60e-07 | 4 |
vascular plexus | 5.48e-07 | 2 |
ventricle of nervous system | 5.48e-07 | 2 |
choroid plexus | 5.48e-07 | 2 |
brain ventricle | 5.48e-07 | 2 |
ventricular system of brain | 5.48e-07 | 2 |
ventricular system of central nervous system | 5.48e-07 | 2 |