FFCP PHASE1:Hg19::chr22:30640029..30640037,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr22:30640029..30640037,- to FFCP PHASE1:Hg19::chr22:30640029..30640037,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:30640029..30640037,- | |||
|description=CAGE_peak_at_chr22:30640029..30640037,- | |||
|id=chr22:30640029..30640037,- | |||
|ontology_enrichment_celltype=CL:0000359!2.19e-10!32;CL:0000192!5.65e-09!42;CL:0000514!5.65e-09!42;CL:0000187!8.88e-09!54;CL:0000680!7.16e-08!57;CL:0000056!7.16e-08!57;CL:0000355!7.16e-08!57;CL:0000548!7.44e-08!679;CL:0000004!7.44e-08!679;CL:0000255!7.44e-08!679;CL:0000393!8.18e-08!60;CL:0000211!8.18e-08!60;CL:0000012!1.33e-07!682;CL:0000003!1.78e-07!722;CL:0000183!2.50e-07!59;CL:0002595!2.90e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002595;4.46e-16;5!CL:0000359;1.15e-10;32!CL:0002593;1.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,3.24e-16,5;CL:0000359,8.10e-11,32;CL:0000192,1.01e-08,43;CL:0000514,1.01e-08,43;CL:0002593,1.43e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!2.19e-13!29;DOID:120!2.29e-13!27;DOID:2394!3.62e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:120;5.03e-21;27!DOID:193;2.60e-19;29!DOID:2394;2.89e-19;14!DOID:4468;4.84e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.04e-20,27;DOID:193,5.09e-19,29;DOID:2394,6.82e-19,14;DOID:4468,7.85e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004573!6.54e-09!33;UBERON:0004571!6.54e-09!33;UBERON:0001637!1.01e-08!42;UBERON:0003509!1.01e-08!42;UBERON:0004572!1.01e-08!42;UBERON:0001134!1.51e-07!61;UBERON:0002036!1.51e-07!61;UBERON:0003082!1.51e-07!61;UBERON:0000992!2.10e-07!13;UBERON:0003834!2.90e-07!5;UBERON:0001533!2.90e-07!5;UBERON:0002385!4.80e-07!63;UBERON:0001015!4.80e-07!63;UBERON:0000383!4.80e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;4.46e-16;5!UBERON:0001533;4.46e-16;5!UBERON:0003513;2.32e-11;7!UBERON:0000992;2.39e-10;13!UBERON:0002118;7.55e-10;5!UBERON:0004573;1.30e-09;33!UBERON:0004571;1.30e-09;33!UBERON:0003134;1.40e-07;33!UBERON:0002456;1.53e-07;2!UBERON:0002119;2.91e-07;4!UBERON:0001637;9.49e-07;42!UBERON:0003509;9.49e-07;42!UBERON:0004572;9.49e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,3.24e-16,5;UBERON:0001533,3.24e-16,5;UBERON:0003513,1.86e-11,7;UBERON:0004573,1.58e-10,33;UBERON:0004571,1.58e-10,33;UBERON:0000992,2.93e-10,13;UBERON:0002118,6.33e-10,5;UBERON:0001637,4.84e-09,42;UBERON:0003509,4.84e-09,42;UBERON:0004572,4.84e-09,42;UBERON:0002456,1.43e-07,2;UBERON:0003134,2.97e-07,37;UBERON:0000474,2.97e-07,37;UBERON:0002119,4.60e-07,4;UBERON:0002049,6.54e-07,78;UBERON:0007798,6.54e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80808358407193,0,0.975865597581014,0,0.408001382488506,0,0,0.273748850145768,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0,0,2.75796544589295,1.29096936716765,4.06279459783025,0,0,0.224723484445085,0.612167784741805,0.320929027076094,1.27867425159808,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,4.12218690475142,0,0,0,1.66518715643378,1.8208308658383,0.657751618414705,0.552700035571697,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.756278537312543,3.54767035940102,1.93236528524877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,1.72131935057184,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,1.48360157567134,0,0,0,0,0,0,1.83892677479412,1.80285670687916,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,1.85194205030644,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,1.47798971368783,0.528290604079356,1.4512968087854,2.30591925467138,0.88369703398466,0,0,0,0,0,0,0,0.112131084345361,0,0,1.55126058909333,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,3.48613383440118,2.39935178836937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.713715955188647,0,0.117141414992713,0,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.308419387605311,1.77561725313127,0.328508624055237,3.11552657510173,0.581051892299796,0,1.40354529212299,0,0.574072240823034,0.364182336013434,0.655622074797121,0,0.462092022626489,0,1.46139224653261,0.633309773357254,0,0,0.215915916102139,0,0,0,0,0,0.895499018888713,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.15350367472613,0.689182862422653,0,0,0.426133137080504,0,0,0,0.127612712494584,0,0,1.25924938732256,0.6970372701606,0.308033580176089,0,0.869932992075073,0.55597265731176,2.57624796135584,0,0.316379424718726,0.38126038784765,0,0,0,3.92474320099615,0,0.274537029736055,0,1.01091240786658,0,1.26377536871694,0,2.68084838594413,10.5650146756755,0,1.41405431953713,0,1.65409603063837,9.28814565337708,20.1687407216731,0,0,0.202910376962704,0,1.12678241012897,0,0,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,1.33570446027487,0,0.211125408127993,0,0.276283915531148,0,0.715880777515084,0,1.86623752597084,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.91153644677601,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,3.37596903244843,1.14262965711403,0,0,0,0,0,0.593042257361244,0,0.208843899010911,0,0.802577647298789,0,0,0,0,0,0,0,0,0.300646838828985,0,0,1.323967823502,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0.353024506766001,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,1.07572403599707,0.191915197319445,0,0,0,1.08599920350743,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.454947352624943,0,7.52850623034149,0,0,0.597019211547496,0,0,2.46223906857616,0,1.77962244319307,0.686520205190771,0.302461847526478,2.64243240990727,5.17493024963719,1.27437413730962,4.04822800947244,1.24210365501008,0.414706207840855,0.265841714557995,2.60872530905867,1.20206087197775,1.14241563650639,0.813741466409323,1.63663793282303,1.28892668450986,3.71227007902795,2.78667122089031,0.400027764663154,0,0,0,0,0.428883182749851,1.56596575179127,0.226705925512272,0,0.244736704506468,0.179088841081487,0.308801447160972,0.219284049578707,0,0.38582807654183,0,0.256241518587947,0.345430341731199,0,0,0.194860308839388,0.265729680626726,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1160556621441,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.655087670040387,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,2.59113109462346,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.255640214277473,0,2.7492824225286,1.24082554265728,1.91107787795487,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0.352894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| ||
|short_description=p@chr22:30640029..30640037,- | |||
}} | }} |
Latest revision as of 20:03, 28 July 2015
Short description: | p@chr22:30640029..30640037, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:30640029..30640037, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 3.24e-16 | 5 |
vascular associated smooth muscle cell | 8.10e-11 | 32 |
smooth muscle cell | 1.01e-08 | 43 |
smooth muscle myoblast | 1.01e-08 | 43 |
smooth muscle cell of the internal thoracic artery | 1.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 3.24e-16 | 5 |
subclavian artery | 3.24e-16 | 5 |
trunk blood vessel | 1.86e-11 | 7 |
systemic artery | 1.58e-10 | 33 |
systemic arterial system | 1.58e-10 | 33 |
female gonad | 2.93e-10 | 13 |
right ovary | 6.33e-10 | 5 |
artery | 4.84e-09 | 42 |
arterial blood vessel | 4.84e-09 | 42 |
arterial system | 4.84e-09 | 42 |
internal thoracic artery | 1.43e-07 | 2 |
female reproductive organ | 2.97e-07 | 37 |
female reproductive system | 2.97e-07 | 37 |
left ovary | 4.60e-07 | 4 |
vasculature | 6.54e-07 | 78 |
vascular system | 6.54e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.04e-20 | 27 |
reproductive organ cancer | 5.09e-19 | 29 |
ovarian cancer | 6.82e-19 | 14 |
clear cell adenocarcinoma | 7.85e-07 | 2 |