FFCP PHASE1:Hg19::chr22:48309685..48309689,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:48309685..48309689,+ | |||
|description=CAGE_peak_at_chr22:48309685..48309689,+ | |description=CAGE_peak_at_chr22:48309685..48309689,+ | ||
|id=chr22:48309685..48309689,+ | |id=chr22:48309685..48309689,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.67e-11;1!CL:0000164;2.67e-11;1!CL:0000502;2.67e-11;1!CL:0000172;2.67e-11;1!CL:0000173;2.67e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.68e-11,1;CL:0000164,2.68e-11,1;CL:0000502,2.68e-11,1;CL:0000172,2.68e-11,1;CL:0000173,2.68e-11,1;CL:0002351,2.68e-11,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.67e-11;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.24e-17!143;DOID:14566!1.18e-16!239;DOID:162!6.77e-16!235;DOID:305!2.69e-12!106;DOID:7!1.27e-08!39;DOID:1749!2.02e-08!14 | |ontology_enrichment_disease=DOID:0050687!4.24e-17!143;DOID:14566!1.18e-16!239;DOID:162!6.77e-16!235;DOID:305!2.69e-12!106;DOID:7!1.27e-08!39;DOID:1749!2.02e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1115;1.89e-12;20!DOID:0050619;2.67e-11;1!DOID:1357;2.67e-11;1!DOID:4430;2.67e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,2.19e-12,20;DOID:4430,2.68e-11,1;DOID:0050619,5.43e-11,1;DOID:1357,5.43e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!4.32e-14!22;UBERON:0001950!7.42e-14!20;UBERON:0000956!5.63e-12!25;UBERON:0000203!5.63e-12!25;UBERON:0001869!4.55e-11!32;UBERON:0000200!1.60e-10!6;UBERON:0001893!3.58e-10!34;UBERON:0002791!2.64e-09!33;UBERON:0002020!6.41e-09!34;UBERON:0003528!6.41e-09!34;UBERON:0002780!7.53e-09!41;UBERON:0001890!7.53e-09!41;UBERON:0006240!7.53e-09!41;UBERON:0003080!1.55e-08!42 | |ontology_enrichment_uberon=UBERON:0002619!4.32e-14!22;UBERON:0001950!7.42e-14!20;UBERON:0000956!5.63e-12!25;UBERON:0000203!5.63e-12!25;UBERON:0001869!4.55e-11!32;UBERON:0000200!1.60e-10!6;UBERON:0001893!3.58e-10!34;UBERON:0002791!2.64e-09!33;UBERON:0002020!6.41e-09!34;UBERON:0003528!6.41e-09!34;UBERON:0002780!7.53e-09!41;UBERON:0001890!7.53e-09!41;UBERON:0006240!7.53e-09!41;UBERON:0003080!1.55e-08!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.61e-17;20!UBERON:0002619;2.95e-15;22!UBERON:0000956;1.88e-13;25!UBERON:0000203;1.88e-13;25!UBERON:0001764;2.67e-11;1!UBERON:0001825;2.67e-11;1!UBERON:0001893;2.61e-09;34!UBERON:0001869;3.05e-09;32!UBERON:0002021;4.58e-09;5!UBERON:0001872;6.69e-09;5!UBERON:0003528;9.04e-09;34!UBERON:0002020;9.04e-09;34!UBERON:0002791;1.06e-08;32!UBERON:0000200;1.47e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.19e-17,20;UBERON:0002619,2.27e-15,22;UBERON:0000956,1.49e-13,25;UBERON:0000203,1.49e-13,25;UBERON:0001764,5.43e-11,1;UBERON:0001825,5.43e-11,1;UBERON:0002791,1.36e-10,32;UBERON:0001869,1.36e-10,32;UBERON:0003528,5.80e-10,34;UBERON:0002020,5.80e-10,34;UBERON:0001893,5.80e-10,34;UBERON:0002021,4.32e-09,5;UBERON:0001872,5.28e-09,5;UBERON:0002780,3.14e-08,41;UBERON:0001890,3.14e-08,41;UBERON:0003080,3.14e-08,41;UBERON:0006240,3.14e-08,41;UBERON:0000200,1.34e-07,6 | |||
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| ||
|short_description=p@chr22:48309685..48309689,+ | |short_description=p@chr22:48309685..48309689,+ | ||
}} | }} |
Latest revision as of 22:14, 28 July 2015
Short description: | p@chr22:48309685..48309689, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:48309685..48309689, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.68e-11 | 1 |
enteroendocrine cell | 2.68e-11 | 1 |
type D enteroendocrine cell | 2.68e-11 | 1 |
somatostatin secreting cell | 2.68e-11 | 1 |
pancreatic D cell | 2.68e-11 | 1 |
progenitor cell of endocrine pancreas | 2.68e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
neocortex | 7.19e-17 | 20 |
regional part of cerebral cortex | 2.27e-15 | 22 |
cerebral cortex | 1.49e-13 | 25 |
pallium | 1.49e-13 | 25 |
maxillary sinus | 5.43e-11 | 1 |
paranasal sinus | 5.43e-11 | 1 |
regional part of telencephalon | 1.36e-10 | 32 |
cerebral hemisphere | 1.36e-10 | 32 |
brain grey matter | 5.80e-10 | 34 |
gray matter | 5.80e-10 | 34 |
telencephalon | 5.80e-10 | 34 |
occipital lobe | 4.32e-09 | 5 |
parietal lobe | 5.28e-09 | 5 |
regional part of forebrain | 3.14e-08 | 41 |
forebrain | 3.14e-08 | 41 |
anterior neural tube | 3.14e-08 | 41 |
future forebrain | 3.14e-08 | 41 |
gyrus | 1.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 2.19e-12 | 20 |
somatostatinoma | 2.68e-11 | 1 |
paranasal sinus cancer | 5.43e-11 | 1 |
maxillary sinus cancer | 5.43e-11 | 1 |