FFCP PHASE1:Hg19::chr2:111435783..111435811,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:111435783..111435811,+ to FFCP PHASE1:Hg19::chr2:111435783..111435811,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_BC040607_5end | |||
|cluster_id=chr2:111435783..111435811,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_BC040607_5end | |||
|id=chr2:111435783..111435811,+ | |||
|ontology_enrichment_celltype=CL:0002032!3.60e-14!165;CL:0000837!3.60e-14!165;CL:0000988!6.07e-14!182;CL:0000037!2.56e-13!172;CL:0000566!2.56e-13!172;CL:0002031!3.95e-12!124;CL:0000738!8.84e-11!140;CL:0002087!7.93e-10!119;CL:0000763!2.56e-08!112;CL:0000049!2.56e-08!112;CL:0000766!5.59e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.27e-12;2!CL:0000558;2.27e-12;2!CL:0000860;2.07e-09;33!CL:0002057;2.07e-09;33!CL:0000775;8.88e-09;3!CL:0000346;1.55e-08;3!CL:1000428;1.55e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.81e-12,2;CL:0000765,1.81e-12,2;CL:0000050,1.81e-12,2;CL:0000038,1.81e-12,2;CL:0000558,1.81e-12,2;CL:0000547,1.81e-12,2;CL:0000549,1.81e-12,2;CL:0000550,1.81e-12,2;CL:0000552,1.81e-12,2;CL:0000775,1.06e-08,3;CL:0000346,1.15e-08,3;CL:1000428,1.15e-08,3;CL:0000860,9.52e-08,42;CL:0002057,9.52e-08,42;CL:0000763,1.51e-07,108;CL:0000049,1.51e-07,108;CL:0000839,6.39e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.55e-08;3!UBERON:0001992;1.55e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.15e-08,3;UBERON:0001992,1.15e-08,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0.492484232307152,0.612002073732759,0.626909442956176,0,0.410623275218653,0.125542639594803,0.534893840235659,0.656804715599566,0.393553906568396,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0.0774672005803016,0.426507697462265,0.293600439334847,0.553995408531877,0.200544447470142,0,0.895661896959697,0,0.77272670290256,0.436194716338694,0,0.242584061187816,0,0,0,0.575384784644301,0,0.236482229888585,0,0,0,0,0,0,2.44867113896722,0.320929027076094,1.91801137739712,0.329851300186716,0.199463657621632,1.27867425159808,3.48251086354301,0,1.24564449799115,0,0,0.434377689410233,3.02699751316684,1.10483290796269,4.74693581161327,0.422510572623884,0.212604299965044,0.628975936525128,0.786300418025466,0.150176892841506,0.16072558669708,0.570025487482497,0.59675003159727,0.547992461293902,0,0,0.889509253863555,0,0.400395987036012,0,1.32208974556972,0.954053754535364,0.569212969109448,0,0.764546456250458,0,1.68152568894461,0,0.196709770113833,0,0,1.5046784585161,0.651844533267181,0,0,0.557052284425868,1.17842362989935,1.55073726208535,0,1.15282187753108,0.780356085359269,0.822189523018381,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.679856056185397,0.383220493601921,0.34362744548263,0.759059076058509,0.637130828648193,0,0.950452044448374,0.301150238155546,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,9.82343066232845,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0.352303495931295,0,0.140450806702248,0,0.368502951935304,0,0,0,0,0,0,0.250237039743928,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0.161646056818812,0,0,0,0.57978255948989,0,0.286804595389004,0.121973706129595,0.265059536642971,0.116193942869518,0.207322110030741,0.504641701751257,0.72995471815166,1.56449532329816,0,1.38134921352481,0,0,0.118306800039844,0,0,0.220587945464788,1.08939722046203,0.474541238222193,0.674156540800822,0.196221465125346,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,1.58040879591855,0,0.738651018262192,0.234004265139238,0.297262324577456,0.93733833986777,0.16798212819886,0,0,0,0.383382679165211,0,0.792435906119034,0.621984346622316,0.720599767084807,0.25248486685276,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0.206768026122887,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0.510281115829547,0,0,0,0.501689773854853,0.764628819135115,0,0.895499018888713,1.53481913652154,1.3071772551245,0,0.328014645699706,0.325378394664303,0,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.413509717453592,0.429680979473094,0.290033387828457,0.170453254832202,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0.616067160352178,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0.438450885253763,1.15755106853338,0,0,0,0.281695602532241,0,0,1.07001315444375,0.709522128141196,0,0,0.379473173765715,1.39973888097993,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0,0.142283686696828,0,0.59873811429845,0,0.635020748171649,0,0,0.684704037099577,0.47003968731907,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0.166849141711909,0.781552381608161,0.556812347790485,0,0.540911356951966,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0.23056390438806,0.269272933229316,0.217294743844016,0,0,0,0,0.156980256395025,0,0.902382642468723,1.7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| 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| ||
|short_description=p2@BC040607 | |||
}} | }} |
Latest revision as of 23:13, 28 July 2015
Short description: | p2@BC040607 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC040607_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -13bp_to_BC040607_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.81e-12 | 2 |
erythroblast | 1.81e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 1.81e-12 | 2 |
erythroid progenitor cell | 1.81e-12 | 2 |
reticulocyte | 1.81e-12 | 2 |
proerythroblast | 1.81e-12 | 2 |
basophilic erythroblast | 1.81e-12 | 2 |
polychromatophilic erythroblast | 1.81e-12 | 2 |
orthochromatic erythroblast | 1.81e-12 | 2 |
neutrophil | 1.06e-08 | 3 |
hair follicle dermal papilla cell | 1.15e-08 | 3 |
stem cell of epidermis | 1.15e-08 | 3 |
classical monocyte | 9.52e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.52e-08 | 42 |
myeloid cell | 1.51e-07 | 108 |
common myeloid progenitor | 1.51e-07 | 108 |
myeloid lineage restricted progenitor cell | 6.39e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.15e-08 | 3 |
papillary layer of dermis | 1.15e-08 | 3 |