FFCP PHASE1:Hg19::chr2:121480592..121480601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:121480592..121480601,+ | |||
|description=CAGE_peak_at_chr2:121480592..121480601,+ | |description=CAGE_peak_at_chr2:121480592..121480601,+ | ||
|id=chr2:121480592..121480601,+ | |id=chr2:121480592..121480601,+ | ||
|ontology_enrichment_celltype=CL:0002334!1.45e-17!12;CL:0000055!5.92e-17!180;CL:0000680!5.71e-16!57;CL:0000056!5.71e-16!57;CL:0000355!5.71e-16!57;CL:0000187!1.06e-15!54;CL:0000183!7.70e-14!59;CL:0000393!1.66e-13!60;CL:0000211!1.66e-13!60;CL:0000192!7.46e-13!42;CL:0000514!7.46e-13!42;CL:0000359!1.50e-12!32;CL:0000048!1.44e-11!430;CL:0000723!3.68e-11!436;CL:0000034!1.23e-10!444;CL:0000057!1.43e-10!75;CL:0000569!1.94e-10!4;CL:0000011!1.94e-10!4;CL:0002582!1.11e-07!3;CL:0002371!1.43e-07!591;CL:0002579!1.53e-07!3;CL:0000222!4.55e-07!119 | |ontology_enrichment_celltype=CL:0002334!1.45e-17!12;CL:0000055!5.92e-17!180;CL:0000680!5.71e-16!57;CL:0000056!5.71e-16!57;CL:0000355!5.71e-16!57;CL:0000187!1.06e-15!54;CL:0000183!7.70e-14!59;CL:0000393!1.66e-13!60;CL:0000211!1.66e-13!60;CL:0000192!7.46e-13!42;CL:0000514!7.46e-13!42;CL:0000359!1.50e-12!32;CL:0000048!1.44e-11!430;CL:0000723!3.68e-11!436;CL:0000034!1.23e-10!444;CL:0000057!1.43e-10!75;CL:0000569!1.94e-10!4;CL:0000011!1.94e-10!4;CL:0002582!1.11e-07!3;CL:0002371!1.43e-07!591;CL:0002579!1.53e-07!3;CL:0000222!4.55e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002195;5.24e-29;2!CL:0002571;5.24e-29;2!CL:0000569;1.66e-15;4!CL:0000228;2.06e-15;1!CL:0002372;2.06e-15;1!CL:0002595;1.38e-12;5!CL:0000048;9.03e-10;58!CL:0000723;1.21e-09;61!CL:0002617;2.31e-08;2!CL:0002596;2.31e-08;2!CL:0000134;4.08e-08;55!CL:0002570;4.58e-08;8 | |ontology_enrichment_celltype_v019=CL:0002195;5.24e-29;2!CL:0002571;5.24e-29;2!CL:0000569;1.66e-15;4!CL:0000228;2.06e-15;1!CL:0002372;2.06e-15;1!CL:0002595;1.38e-12;5!CL:0000048;9.03e-10;58!CL:0000723;1.21e-09;61!CL:0002617;2.31e-08;2!CL:0002596;2.31e-08;2!CL:0000134;4.08e-08;55!CL:0002570;4.58e-08;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002195,9.30e-29,2;CL:0002571,9.30e-29,2;CL:0000569,1.66e-15,4;CL:0000011,1.66e-15,4;CL:0000228,1.78e-15,1;CL:0002372,1.78e-15,1;CL:0002595,1.34e-12,5;CL:0002596,1.73e-08,2;CL:0002617,2.87e-08,2;CL:0002570,4.19e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000011;1.66e-15;4 | |ontology_enrichment_development_v019=CL:0000011;1.66e-15;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003834;1.38e-12;5!UBERON:0001533;1.38e-12;5!UBERON:0003513;2.98e-09;7!UBERON:0005396;2.31e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0003834;1.38e-12;5!UBERON:0001533;1.38e-12;5!UBERON:0003513;2.98e-09;7!UBERON:0005396;2.31e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.34e-12,5;UBERON:0001533,1.34e-12,5;UBERON:0003513,2.92e-09,7;UBERON:0005396,1.73e-08,2;UBERON:0003914,4.35e-07,117 | |||
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|short_description=p@chr2:121480592..121480601,+ | |short_description=p@chr2:121480592..121480601,+ | ||
}} | }} |
Latest revision as of 23:57, 28 July 2015
Short description: | p@chr2:121480592..121480601, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:121480592..121480601, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 9.30e-29 | 2 |
hepatic mesenchymal stem cell | 9.30e-29 | 2 |
cardiac mesenchymal cell | 1.66e-15 | 4 |
migratory trunk neural crest cell | 1.66e-15 | 4 |
multinucleate cell | 1.78e-15 | 1 |
myotube | 1.78e-15 | 1 |
smooth muscle cell of the subclavian artery | 1.34e-12 | 5 |
smooth muscle cell of the carotid artery | 1.73e-08 | 2 |
adipocyte of breast | 2.87e-08 | 2 |
mesenchymal stem cell of adipose | 4.19e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.34e-12 | 5 |
subclavian artery | 1.34e-12 | 5 |
trunk blood vessel | 2.92e-09 | 7 |
carotid artery segment | 1.73e-08 | 2 |
epithelial tube | 4.35e-07 | 117 |