FFCP PHASE1:Hg19::chr2:122660104..122660115,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:122660104..122660115,+ | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_at_chr2:122660104..122660115,+ | |description=CAGE_peak_at_chr2:122660104..122660115,+ | ||
|id=chr2:122660104..122660115,+ | |id=chr2:122660104..122660115,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.04e-07;2!CL:0000242;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.70e-13;1 | |||
|ontology_enrichment_disease=DOID:3095!5.36e-07!22;DOID:2994!5.36e-07!22 | |ontology_enrichment_disease=DOID:3095!5.36e-07!22;DOID:2994!5.36e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.88e-25;2!DOID:171;2.89e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.89e-25,2;DOID:171,3.26e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.96e-13!115;UBERON:0007100!1.56e-12!27;UBERON:0000991!1.88e-09!21;UBERON:0009196!1.88e-09!21;UBERON:0009117!1.88e-09!21;UBERON:0005564!1.88e-09!21;UBERON:0000948!2.51e-09!24;UBERON:0005498!2.51e-09!24;UBERON:0004140!2.51e-09!24;UBERON:0009881!2.51e-09!24;UBERON:0004141!2.51e-09!24;UBERON:0003084!2.51e-09!24;UBERON:0007005!2.51e-09!24;UBERON:0004139!2.51e-09!24;UBERON:0004291!2.51e-09!24;UBERON:0004176!7.02e-09!22;UBERON:0001869!1.80e-08!32;UBERON:0001893!9.26e-08!34;UBERON:0002619!2.44e-07!22;UBERON:0002323!4.29e-07!46;UBERON:0002791!6.30e-07!33;UBERON:0002780!8.05e-07!41;UBERON:0001890!8.05e-07!41;UBERON:0006240!8.05e-07!41;UBERON:0001950!9.67e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!4.96e-13!115;UBERON:0007100!1.56e-12!27;UBERON:0000991!1.88e-09!21;UBERON:0009196!1.88e-09!21;UBERON:0009117!1.88e-09!21;UBERON:0005564!1.88e-09!21;UBERON:0000948!2.51e-09!24;UBERON:0005498!2.51e-09!24;UBERON:0004140!2.51e-09!24;UBERON:0009881!2.51e-09!24;UBERON:0004141!2.51e-09!24;UBERON:0003084!2.51e-09!24;UBERON:0007005!2.51e-09!24;UBERON:0004139!2.51e-09!24;UBERON:0004291!2.51e-09!24;UBERON:0004176!7.02e-09!22;UBERON:0001869!1.80e-08!32;UBERON:0001893!9.26e-08!34;UBERON:0002619!2.44e-07!22;UBERON:0002323!4.29e-07!46;UBERON:0002791!6.30e-07!33;UBERON:0002780!8.05e-07!41;UBERON:0001890!8.05e-07!41;UBERON:0006240!8.05e-07!41;UBERON:0001950!9.67e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;5.70e-13;1!UBERON:0001003;6.60e-13;15!UBERON:0007376;6.60e-13;15!UBERON:0002346;9.46e-13;4!UBERON:0000923;9.46e-13;4!UBERON:0010316;9.46e-13;4!UBERON:0005291;9.46e-13;4!UBERON:0002050;2.19e-10;5!UBERON:0005423;2.19e-10;5!UBERON:0000948;1.06e-08;22!UBERON:0007100;1.12e-07;25!UBERON:0002133;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,2.95e-13,1;UBERON:0001003,5.49e-13,15;UBERON:0007376,5.49e-13,15;UBERON:0007383,5.49e-13,15;UBERON:0000948,5.14e-08,24;UBERON:0005498,5.14e-08,24;UBERON:0004140,5.14e-08,24;UBERON:0009881,5.14e-08,24;UBERON:0004141,5.14e-08,24;UBERON:0003084,5.14e-08,24;UBERON:0007005,5.14e-08,24;UBERON:0004139,5.14e-08,24;UBERON:0004291,5.14e-08,24;UBERON:0002133,2.91e-07,2;UBERON:0002097,3.48e-07,41;UBERON:0007100,3.82e-07,27 | |||
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| ||
|short_description=p@chr2:122660104..122660115,+ | |short_description=p@chr2:122660104..122660115,+ | ||
}} | }} |
Latest revision as of 00:00, 29 July 2015
Short description: | p@chr2:122660104..122660115, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:122660104..122660115, + |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 2.95e-13 | 1 |
skin epidermis | 5.49e-13 | 15 |
outer epithelium | 5.49e-13 | 15 |
enveloping layer of ectoderm | 5.49e-13 | 15 |
heart | 5.14e-08 | 24 |
primitive heart tube | 5.14e-08 | 24 |
primary heart field | 5.14e-08 | 24 |
anterior lateral plate mesoderm | 5.14e-08 | 24 |
heart tube | 5.14e-08 | 24 |
heart primordium | 5.14e-08 | 24 |
cardiac mesoderm | 5.14e-08 | 24 |
cardiogenic plate | 5.14e-08 | 24 |
heart rudiment | 5.14e-08 | 24 |
atrioventricular valve | 2.91e-07 | 2 |
skin of body | 3.48e-07 | 41 |
primary circulatory organ | 3.82e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.89e-25 | 2 |
neuroectodermal tumor | 3.26e-11 | 10 |