FFCP PHASE1:Hg19::chr2:149862509..149862533,+: Difference between revisions
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|id=chr2:149862509..149862533,+
|short_description=p@chr2:149862509..149862533,+
|description=CAGE_peak_at_chr2:149862509..149862533,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:149862509..149862533,+ | |||
|coexpression_cluster_id=C541 | |||
|description=CAGE_peak_at_chr2:149862509..149862533,+ | |||
|id=chr2:149862509..149862533,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.97e-34;1!UBERON:0009847;2.74e-12;3!UBERON:0003353;2.74e-12;3 | |||
|ontology_enrichment_disease=DOID:5093!1.48e-11!4;DOID:1612!1.48e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.69e-34;4!DOID:1612;7.69e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.36e-34,4;DOID:1612,8.36e-34,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000996;5.97e-34;1!UBERON:0000310;3.14e-14;10!UBERON:0001443;4.95e-13;11!UBERON:0002106;2.74e-12;3!UBERON:0000077;1.02e-11;27!UBERON:0001911;1.50e-09;4!UBERON:0004177;6.78e-08;5!UBERON:0005057;6.78e-08;5 | |||
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| ||
|short_description=p@chr2:149862509..149862533,+ | |||
}} | }} |
Latest revision as of 01:11, 29 July 2015
Short description: | p@chr2:149862509..149862533, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:149862509..149862533, + |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
vagina | 5.05e-34 | 1 |
breast | 3.25e-14 | 10 |
chest | 5.10e-13 | 11 |
spleen | 3.24e-12 | 3 |
gastrointestinal system mesentery | 3.24e-12 | 3 |
stomach region | 3.24e-12 | 3 |
mesentery | 3.24e-12 | 3 |
gastrointestinal system serosa | 3.24e-12 | 3 |
mesentery of stomach | 3.24e-12 | 3 |
gut mesentery | 3.24e-12 | 3 |
dorsal mesentery | 3.24e-12 | 3 |
dorsal mesogastrium | 3.24e-12 | 3 |
peritoneal cavity | 3.24e-12 | 3 |
spleen primordium | 3.24e-12 | 3 |
mixed endoderm/mesoderm-derived structure | 5.69e-11 | 29 |
cloaca | 1.90e-10 | 14 |
anal region | 1.90e-10 | 14 |
embryonic cloaca | 1.90e-10 | 14 |
terminal part of digestive tract | 1.90e-10 | 14 |
primitive urogenital sinus | 1.90e-10 | 14 |
proctodeum | 1.90e-10 | 14 |
genitourinary system | 8.10e-10 | 15 |
mammary gland | 1.57e-09 | 4 |
mammary bud | 1.57e-09 | 4 |
mammary ridge | 1.57e-09 | 4 |
mammary placode | 1.57e-09 | 4 |
epithelial bud | 8.39e-09 | 37 |
hindgut | 5.94e-08 | 19 |
epithelial fold | 4.50e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.36e-34 | 4 |
breast cancer | 8.36e-34 | 4 |