FFCP PHASE1:Hg19::chr2:16084302..16084307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:16084302..16084307,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_at_chr2:16084302..16084307,+ | |||
|id=chr2:16084302..16084307,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.02e-32!8;CL:0000540!9.49e-20!6;CL:0000031!9.49e-20!6;CL:0000404!9.49e-20!6;CL:0002319!2.94e-17!25;CL:0002262!1.54e-15!2;CL:1000398!1.54e-15!2;CL:0000133!5.79e-12!59;CL:0000221!4.75e-10!71 | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.15e-21;5!CL:0002321;5.93e-08;15!CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59;CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;9.07e-18;6!DOID:171;3.02e-11;10!DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.07e-18,6;DOID:171,3.02e-11,10;DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0002902!4.20e-29!1;UBERON:0009899!4.20e-29!1;UBERON:0003497!8.17e-11!3;UBERON:0003909!8.17e-11!3;UBERON:0003835!8.17e-11!3;UBERON:0001281!8.17e-11!3;UBERON:0000073!9.75e-11!94;UBERON:0001016!9.75e-11!94;UBERON:0001017!9.83e-09!82;UBERON:0001280!1.96e-08!4;UBERON:0004647!1.96e-08!4;UBERON:0005743!2.39e-08!86;UBERON:0000966!4.79e-07!5;UBERON:0005388!4.79e-07!5;UBERON:0001802!4.79e-07!5;UBERON:0000013!5.08e-07!5;UBERON:0002410!5.08e-07!5;UBERON:0002021!6.77e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000013;5.15e-21;5!UBERON:0002410;5.15e-21;5!UBERON:0000010;2.45e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.15e-21,5;UBERON:0002410,5.15e-21,5;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000010,2.45e-12,8 | |||
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|short_description=p@chr2:16084302..16084307,+ | |||
}} | }} |
Latest revision as of 01:49, 29 July 2015
Short description: | p@chr2:16084302..16084307, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:16084302..16084307, + |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.15e-21 | 5 |
autonomic nervous system | 5.15e-21 | 5 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
peripheral nervous system | 2.45e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.07e-18 | 6 |
neuroectodermal tumor | 3.02e-11 | 10 |
nervous system cancer | 1.22e-09 | 11 |