FFCP PHASE1:Hg19::chr2:16085862..16085895,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:16085862..16085895,- | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_at_chr2:16085862..16085895,- | |description=CAGE_peak_at_chr2:16085862..16085895,- | ||
|id=chr2:16085862..16085895,- | |id=chr2:16085862..16085895,- | ||
|ontology_enrichment_celltype=CL:0000039!1.63e-14!7;CL:0000586!1.63e-14!7;CL:0000540!4.07e-13!6;CL:0000031!4.07e-13!6;CL:0000404!4.07e-13!6;CL:0002322!1.39e-11!5;CL:0000047!1.35e-09!8 | |ontology_enrichment_celltype=CL:0000039!1.63e-14!7;CL:0000586!1.63e-14!7;CL:0000540!4.07e-13!6;CL:0000031!4.07e-13!6;CL:0000404!4.07e-13!6;CL:0002322!1.39e-11!5;CL:0000047!1.35e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0002321;8.35e-28;15!CL:0002322;1.77e-27;5!CL:0000333;6.22e-17;5!CL:0000540;1.46e-13;6!CL:0000404;1.46e-13;6!CL:0000039;7.55e-12;7!CL:0000586;7.55e-12;7!CL:0000148;3.01e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.17e-27,5;CL:0000540,1.46e-13,6;CL:0000031,1.46e-13,6;CL:0000404,1.46e-13,6;CL:0000133,7.75e-13,59;CL:0000039,8.44e-12,7;CL:0000586,8.44e-12,7;CL:0000221,2.60e-10,72;CL:0000047,2.62e-10,8;CL:0000333,2.46e-09,41;CL:0000148,2.79e-08,10;CL:0000541,2.79e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.46e-13;6!CL:0000133;2.13e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!3.84e-14!22;DOID:2994!3.84e-14!22 | |ontology_enrichment_disease=DOID:3095!3.84e-14!22;DOID:2994!3.84e-14!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.11e-24;22!DOID:2994;1.11e-24;22!DOID:169;3.31e-14;6!DOID:1799;3.10e-10;1!DOID:10165;3.10e-10;1!DOID:1798;3.10e-10;1!DOID:171;1.00e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.35e-24,22;DOID:2994,1.35e-24,22;DOID:169,3.32e-14,6;DOID:1799,3.71e-10,1;DOID:10165,3.71e-10,1;DOID:1798,3.71e-10,1;DOID:171,1.00e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.41e-10!94;UBERON:0001016!1.41e-10!94;UBERON:0001017!6.06e-10!82;UBERON:0005743!3.51e-09!86;UBERON:0002780!1.03e-07!41;UBERON:0001890!1.03e-07!41;UBERON:0006240!1.03e-07!41;UBERON:0003080!1.89e-07!42;UBERON:0002020!2.02e-07!34;UBERON:0003528!2.02e-07!34;UBERON:0001893!2.28e-07!34;UBERON:0001869!7.94e-07!32 | |ontology_enrichment_uberon=UBERON:0000073!1.41e-10!94;UBERON:0001016!1.41e-10!94;UBERON:0001017!6.06e-10!82;UBERON:0005743!3.51e-09!86;UBERON:0002780!1.03e-07!41;UBERON:0001890!1.03e-07!41;UBERON:0006240!1.03e-07!41;UBERON:0003080!1.89e-07!42;UBERON:0002020!2.02e-07!34;UBERON:0003528!2.02e-07!34;UBERON:0001893!2.28e-07!34;UBERON:0001869!7.94e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;6.22e-17;5!UBERON:0002410;6.22e-17;5!UBERON:0000010;1.21e-09;8!UBERON:0000922;1.04e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.22e-17,5;UBERON:0002410,6.22e-17,5;UBERON:0000010,1.21e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.85870796139317,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.795178609928912,1.2781333715647,1.34759371519982,1.51392510525377,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59426272728822,0.59873811429845,1.1490322207942,0.635020748171649,0,0.842391534340376,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,3.44743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,2.3056390438806,2.42345639906385,0.434589487688032,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,1.76828463311521,2.20063098555574,0.415440338029185,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0220709025433,9.81205783709804,0,33.9641974777163,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,1.00828678488687,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,2.09525355585138,0,0,0.0675375846183947,0,0,0,1.64092442705466,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0.266107110487916,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,19.2776606313926,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0.872701380680755,0,0,0,0,2.27099564703142,1.09265571963696,0,0.101988829741982,0.801652215796681,0.643264296743914,1.0028301571695,0.151557396436479,0,0,0,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.85870796139317,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.795178609928912,1.2781333715647,1.34759371519982,1.51392510525377,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59426272728822,0.59873811429845,1.1490322207942,0.635020748171649,0,0.842391534340376,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,3.44743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,2.3056390438806,2.42345639906385,0.434589487688032,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,1.76828463311521,2.20063098555574,0.415440338029185,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0220709025433,9.81205783709804,0,33.9641974777163,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,1.00828678488687,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,2.09525355585138,0,0,0.0675375846183947,0,0,0,1.64092442705466,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0.266107110487916,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,19.2776606313926,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0.872701380680755,0,0,0,0,2.27099564703142,1.09265571963696,0,0.101988829741982,0.801652215796681,0.643264296743914,1.0028301571695,0.151557396436479,0,0,0,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:16085862..16085895,- | |short_description=p@chr2:16085862..16085895,- | ||
}} | }} |
Latest revision as of 01:49, 29 July 2015
Short description: | p@chr2:16085862..16085895, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:16085862..16085895, - |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.17e-27 | 5 |
neuron | 1.46e-13 | 6 |
neuroblast | 1.46e-13 | 6 |
electrically signaling cell | 1.46e-13 | 6 |
neurectodermal cell | 7.75e-13 | 59 |
germ line cell | 8.44e-12 | 7 |
germ cell | 8.44e-12 | 7 |
ectodermal cell | 2.60e-10 | 72 |
neuronal stem cell | 2.62e-10 | 8 |
migratory neural crest cell | 2.46e-09 | 41 |
melanocyte | 2.79e-08 | 10 |
melanoblast | 2.79e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.22e-17 | 5 |
autonomic nervous system | 6.22e-17 | 5 |
peripheral nervous system | 1.21e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.35e-24 | 22 |
germ cell cancer | 1.35e-24 | 22 |
neuroendocrine tumor | 3.32e-14 | 6 |
islet cell tumor | 3.71e-10 | 1 |
endocrine pancreas cancer | 3.71e-10 | 1 |
pancreatic endocrine carcinoma | 3.71e-10 | 1 |
neuroectodermal tumor | 1.00e-08 | 10 |