FFCP PHASE1:Hg19::chr2:168243434..168243438,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:168243434..168243438,+ | |||
|coexpression_cluster_id=C232 | |||
|description=CAGE_peak_at_chr2:168243434..168243438,+ | |||
|id=chr2:168243434..168243438,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.03e-14!5;CL:0000064!5.97e-08!3;CL:0005012!5.97e-08!3;CL:0000067!5.97e-08!3;CL:0002304!5.97e-08!3;CL:0000540!6.53e-08!6;CL:0000031!6.53e-08!6;CL:0000404!6.53e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.03e-32;5!CL:0002321;2.18e-11;15!CL:0000148;4.04e-08;10!CL:0000307;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.59e-32,5;CL:0000148,4.50e-08,10;CL:0000541,4.50e-08,10;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.79e-07;3 | |||
|ontology_enrichment_disease=DOID:162!6.28e-17!235;DOID:0050687!2.23e-16!143;DOID:14566!2.61e-16!239;DOID:305!5.91e-11!106;DOID:3095!2.08e-10!22;DOID:2994!2.08e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.33e-08;22!DOID:2994;4.33e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.03e-08,22;DOID:2994,4.03e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000488!3.24e-10!4;UBERON:0001778!5.97e-08!3;UBERON:0001775!5.97e-08!3;UBERON:0002203!8.06e-07!6;UBERON:0001768!8.06e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.265059536642971,1.51052125730374,1.0366105501537,0.504641701751257,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0.169346664131569,0,0,0.964518890790115,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0.758245587708239,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0.192914038270915,0,1.79369063011563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,1.53916723443601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,1.89249637252618,6.22813760193065,5.06794004045748,0.917899467677836,0,0.0918948995348449,0.50141507858475,0,0.267964130156178,0,0,0,0,0,0,2.35476911419288,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:168243434..168243438,+ | |||
}} |
Latest revision as of 02:13, 29 July 2015
Short description: | p@chr2:168243434..168243438, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:168243434..168243438, + |
Coexpression cluster: | C232_teratocarcinoma_HES3GFP_H9_iPS_testicular_neuroblastoma_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.59e-32 | 5 |
melanocyte | 4.50e-08 | 10 |
melanoblast | 4.50e-08 | 10 |
duct epithelial cell | 3.16e-07 | 3 |
branched duct epithelial cell | 3.16e-07 | 3 |
tracheal epithelial cell | 3.16e-07 | 3 |
tracheoblast | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.03e-08 | 22 |
germ cell cancer | 4.03e-08 | 22 |