FFCP PHASE1:Hg19::chr2:174557411..174557430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:174557411..174557430,+ | |||
|description=CAGE_peak_at_chr2:174557411..174557430,+ | |||
|id=chr2:174557411..174557430,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.69e-25!254;CL:0000223!2.41e-13!59;CL:0002251!8.82e-12!21;CL:0002076!5.88e-11!43;CL:0000039!2.99e-10!7;CL:0000586!2.99e-10!7;CL:0002322!7.96e-09!5;CL:0000082!7.97e-09!19;CL:0002178!9.49e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.27e-09;7!CL:0000586;1.27e-09;7!CL:0002251;5.22e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.85e-10,253;CL:0000039,1.29e-09,7;CL:0000586,1.29e-09,7;CL:0002251,5.09e-09,20;CL:0002076,8.55e-08,42;CL:0000223,5.17e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.10e-07;10!UBERON:0005564;7.10e-07;10 | |||
|ontology_enrichment_disease=DOID:305!5.24e-55!106;DOID:0050687!2.92e-42!143;DOID:162!1.93e-32!235;DOID:14566!2.45e-31!239;DOID:1749!5.84e-20!14;DOID:299!1.54e-14!25;DOID:3905!1.29e-13!9;DOID:0050615!1.80e-13!16;DOID:1324!8.74e-12!15;DOID:3908!1.13e-10!5;DOID:0050686!3.72e-09!137;DOID:3095!6.82e-09!22;DOID:2994!6.82e-09!22;DOID:3119!8.87e-08!14;DOID:4556!4.14e-07!3;DOID:1325!4.53e-07!7;DOID:3904!4.53e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.16e-18;14!DOID:0050619;2.20e-08;1!DOID:3151;2.20e-08;1!DOID:1357;2.20e-08;1!DOID:3149;2.20e-08;1!DOID:3905;7.49e-08;9!DOID:0050615;2.05e-07;16!DOID:305;3.88e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.23e-23,106;DOID:1749,4.59e-18,14;DOID:0050687,2.38e-16,143;DOID:162,3.58e-16,235;DOID:14566,9.60e-16,239;DOID:0050619,1.59e-08,1;DOID:1357,1.59e-08,1;DOID:3151,1.98e-08,1;DOID:3149,1.98e-08,1;DOID:3905,6.59e-08,9;DOID:0050615,1.73e-07,16;DOID:3908,9.16e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.21e-13!169;UBERON:0000925!8.21e-13!169;UBERON:0006595!8.21e-13!169;UBERON:0001007!1.77e-12!155;UBERON:0001555!1.77e-12!155;UBERON:0007026!1.77e-12!155;UBERON:0003343!7.89e-10!4;UBERON:0004785!7.89e-10!4;UBERON:0000344!9.80e-10!12;UBERON:0004921!1.23e-09!129;UBERON:0004185!1.23e-09!129;UBERON:0000077!1.26e-09!130;UBERON:0001041!5.10e-09!98;UBERON:0004802!7.97e-09!19;UBERON:0000115!7.97e-09!19;UBERON:0003729!8.10e-08!5;UBERON:0001004!8.48e-08!72;UBERON:0004807!9.05e-08!28;UBERON:0000464!1.18e-07!104;UBERON:0000466!1.48e-07!126;UBERON:0005911!1.84e-07!82;UBERON:0005409!2.02e-07!35;UBERON:0002048!2.52e-07!22;UBERON:0000117!2.52e-07!22;UBERON:0000171!2.52e-07!22;UBERON:0000170!2.52e-07!22;UBERON:0005597!2.52e-07!22;UBERON:0000118!2.52e-07!22;UBERON:0001723!4.49e-07!3;UBERON:0001033!4.49e-07!3;UBERON:0010056!4.49e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.68e-29;4!UBERON:0004785;2.68e-29;4!UBERON:0000974;1.26e-19;6!UBERON:0003729;3.78e-09;13!UBERON:0000473;1.76e-08;8!UBERON:0001764;2.20e-08;1!UBERON:0001825;2.20e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.51e-29,4;UBERON:0004785,2.51e-29,4;UBERON:0000974,7.29e-12,10;UBERON:0003729,3.71e-09,13;UBERON:0001764,1.59e-08,1;UBERON:0001825,1.59e-08,1;UBERON:0000473,1.79e-08,8 | |||
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| ||
|short_description=p@chr2:174557411..174557430,+ | |||
}} | }} |
Latest revision as of 02:34, 29 July 2015
Short description: | p@chr2:174557411..174557430, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:174557411..174557430, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.85e-10 | 253 |
germ line cell | 1.29e-09 | 7 |
germ cell | 1.29e-09 | 7 |
epithelial cell of alimentary canal | 5.09e-09 | 20 |
endo-epithelial cell | 8.55e-08 | 42 |
endodermal cell | 5.17e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.51e-29 | 4 |
respiratory system mucosa | 2.51e-29 | 4 |
neck | 7.29e-12 | 10 |
mouth mucosa | 3.71e-09 | 13 |
maxillary sinus | 1.59e-08 | 1 |
paranasal sinus | 1.59e-08 | 1 |
testis | 1.79e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.23e-23 | 106 |
squamous cell carcinoma | 4.59e-18 | 14 |
cell type cancer | 2.38e-16 | 143 |
cancer | 3.58e-16 | 235 |
disease of cellular proliferation | 9.60e-16 | 239 |
paranasal sinus cancer | 1.59e-08 | 1 |
maxillary sinus cancer | 1.59e-08 | 1 |
skin squamous cell carcinoma | 1.98e-08 | 1 |
keratoacanthoma | 1.98e-08 | 1 |
lung carcinoma | 6.59e-08 | 9 |
respiratory system cancer | 1.73e-07 | 16 |
non-small cell lung carcinoma | 9.16e-07 | 5 |