FFCP PHASE1:Hg19::chr2:189926301..189926315,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189926301..189926315,+ | |||
|description=CAGE_peak_at_chr2:189926301..189926315,+ | |description=CAGE_peak_at_chr2:189926301..189926315,+ | ||
|id=chr2:189926301..189926315,+ | |id=chr2:189926301..189926315,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.27e-20!180;CL:0000057!1.57e-15!75;CL:0000222!1.23e-09!119;CL:0000680!1.70e-09!57;CL:0000056!1.70e-09!57;CL:0000355!1.70e-09!57;CL:0000187!6.78e-09!54;CL:0000183!2.27e-08!59;CL:0000144!1.57e-07!625;CL:0000393!2.87e-07!60;CL:0000211!2.87e-07!60;CL:0002371!8.07e-07!591;CL:0000499!8.36e-07!27 | |ontology_enrichment_celltype=CL:0000055!1.27e-20!180;CL:0000057!1.57e-15!75;CL:0000222!1.23e-09!119;CL:0000680!1.70e-09!57;CL:0000056!1.70e-09!57;CL:0000355!1.70e-09!57;CL:0000187!6.78e-09!54;CL:0000183!2.27e-08!59;CL:0000144!1.57e-07!625;CL:0000393!2.87e-07!60;CL:0000211!2.87e-07!60;CL:0002371!8.07e-07!591;CL:0000499!8.36e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000197;2.49e-17;6!CL:0000098;2.49e-17;6!CL:0002167;2.49e-17;6!CL:0002195;2.10e-13;2!CL:0002571;2.10e-13;2!CL:0000135;1.37e-09;3!CL:0000388;1.37e-09;3!CL:0002581;5.57e-08;1!CL:0000499;1.19e-07;28 | |ontology_enrichment_celltype_v019=CL:0000197;2.49e-17;6!CL:0000098;2.49e-17;6!CL:0002167;2.49e-17;6!CL:0002195;2.10e-13;2!CL:0002571;2.10e-13;2!CL:0000135;1.37e-09;3!CL:0000388;1.37e-09;3!CL:0002581;5.57e-08;1!CL:0000499;1.19e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.12e-17,6;CL:0000098,2.12e-17,6;CL:0002167,2.12e-17,6;CL:0002195,3.71e-13,2;CL:0002571,3.71e-13,2;CL:0000135,9.14e-10,3;CL:0000388,9.14e-10,3;CL:0002581,4.57e-08,1;CL:0000499,9.18e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.57e-08;1 | |ontology_enrichment_development_v019=UBERON:0000358;5.57e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;1.53e-07;1 | |ontology_enrichment_disease_v019=DOID:3571;1.53e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,2.31e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.19e-08!83;UBERON:0002329!1.19e-08!83;UBERON:0003077!1.19e-08!83;UBERON:0003059!1.19e-08!83;UBERON:0007282!1.19e-08!83;UBERON:0009618!1.19e-08!83;UBERON:0007285!1.19e-08!83;UBERON:0002385!1.90e-08!63;UBERON:0001015!1.90e-08!63;UBERON:0000383!1.90e-08!63;UBERON:0001134!2.40e-08!61;UBERON:0002036!2.40e-08!61;UBERON:0003082!2.40e-08!61;UBERON:0004872!2.38e-07!84;UBERON:0002049!2.87e-07!79;UBERON:0007798!2.87e-07!79;UBERON:0000490!3.56e-07!138;UBERON:0004535!7.34e-07!110 | |ontology_enrichment_uberon=UBERON:0000914!1.19e-08!83;UBERON:0002329!1.19e-08!83;UBERON:0003077!1.19e-08!83;UBERON:0003059!1.19e-08!83;UBERON:0007282!1.19e-08!83;UBERON:0009618!1.19e-08!83;UBERON:0007285!1.19e-08!83;UBERON:0002385!1.90e-08!63;UBERON:0001015!1.90e-08!63;UBERON:0000383!1.90e-08!63;UBERON:0001134!2.40e-08!61;UBERON:0002036!2.40e-08!61;UBERON:0003082!2.40e-08!61;UBERON:0004872!2.38e-07!84;UBERON:0002049!2.87e-07!79;UBERON:0007798!2.87e-07!79;UBERON:0000490!3.56e-07!138;UBERON:0004535!7.34e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.37e-09;3!UBERON:0000043;1.37e-09;3!UBERON:0007845;1.37e-09;3!UBERON:0004905;1.11e-07;8!UBERON:0000982;1.11e-07;8!UBERON:0004770;1.11e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0007846;1.37e-09;3!UBERON:0000043;1.37e-09;3!UBERON:0007845;1.37e-09;3!UBERON:0004905;1.11e-07;8!UBERON:0000982;1.11e-07;8!UBERON:0004770;1.11e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.14e-10,3;UBERON:0000043,9.14e-10,3;UBERON:0007845,9.14e-10,3;UBERON:0004905,1.40e-07,8;UBERON:0000982,1.40e-07,8;UBERON:0004770,1.40e-07,8 | |||
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|short_description=p@chr2:189926301..189926315,+ | |short_description=p@chr2:189926301..189926315,+ | ||
}} | }} |
Latest revision as of 04:17, 29 July 2015
Short description: | p@chr2:189926301..189926315, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189926301..189926315, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.12e-17 | 6 |
sensory epithelial cell | 2.12e-17 | 6 |
olfactory epithelial cell | 2.12e-17 | 6 |
hepatic stem cell | 3.71e-13 | 2 |
hepatic mesenchymal stem cell | 3.71e-13 | 2 |
fibrocyte | 9.14e-10 | 3 |
tendon cell | 9.14e-10 | 3 |
perirenal preadipocyte | 4.57e-08 | 1 |
stromal cell | 9.18e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.14e-10 | 3 |
tendon | 9.14e-10 | 3 |
regular connective tissue | 9.14e-10 | 3 |
articulation | 1.40e-07 | 8 |
skeletal joint | 1.40e-07 | 8 |
articular system | 1.40e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.31e-07 | 1 |