FFCP PHASE1:Hg19::chr2:20402607..20402620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:20402607..20402620,- | |||
|coexpression_cluster_id=C572 | |||
|description=CAGE_peak_at_chr2:20402607..20402620,- | |description=CAGE_peak_at_chr2:20402607..20402620,- | ||
|id=chr2:20402607..20402620,- | |id=chr2:20402607..20402620,- | ||
|ontology_enrichment_celltype=CL:0000066!9.80e-19!254;CL:0002076!5.16e-15!43;CL:0000223!2.68e-14!59;CL:0002368!2.04e-11!13;CL:0002321!5.29e-09!248;CL:0000220!5.84e-09!246;CL:0002202!1.74e-08!9;CL:0002632!1.74e-08!9 | |ontology_enrichment_celltype=CL:0000066!9.80e-19!254;CL:0002076!5.16e-15!43;CL:0000223!2.68e-14!59;CL:0002368!2.04e-11!13;CL:0002321!5.29e-09!248;CL:0000220!5.84e-09!246;CL:0002202!1.74e-08!9;CL:0002632!1.74e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.16e-21;13!CL:0002076;3.67e-17;42!CL:0002159;4.97e-16;14!CL:0002202;1.21e-14;9!CL:0002632;1.21e-14;9!CL:0002328;4.01e-12;3!CL:0000307;6.12e-12;3!CL:0000240;2.09e-10;6!CL:0000311;2.09e-10;6!CL:0000079;2.09e-10;6!CL:0000237;2.09e-10;6!CL:0000244;3.52e-09;4!CL:0000731;3.52e-09;4!CL:0002327;7.42e-09;4!CL:0000575;1.09e-08;2!CL:0002536;8.75e-08;2!CL:0000312;1.72e-07;5!CL:0000622;4.70e-07;5!CL:0000362;6.28e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.65e-24,42;CL:0002368,1.04e-21,13;CL:0000223,4.11e-18,58;CL:0002159,3.48e-16,14;CL:0000066,1.19e-14,253;CL:0002202,1.42e-14,9;CL:0002632,1.42e-14,9;CL:0002328,4.59e-12,3;CL:0000068,6.87e-12,3;CL:0000069,6.87e-12,3;CL:0000307,6.87e-12,3;CL:0000377,6.87e-12,3;CL:0000240,1.73e-10,6;CL:0000311,1.73e-10,6;CL:0000079,1.73e-10,6;CL:0000237,1.73e-10,6;CL:0000036,1.73e-10,6;CL:0000357,1.73e-10,6;CL:0000114,1.73e-10,6;CL:0000244,2.72e-09,4;CL:0000731,2.72e-09,4;CL:0002327,8.51e-09,4;CL:0000575,9.57e-09,2;CL:0002321,8.64e-08,250;CL:0000312,1.60e-07,5;CL:0002536,1.70e-07,2;CL:0000622,4.86e-07,5;CL:0000362,6.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;6.12e-12;3!CL:0000357;2.09e-10;6!CL:0000114;2.09e-10;6!CL:0000223;3.61e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.61e-16!169;UBERON:0000925!2.61e-16!169;UBERON:0006595!2.61e-16!169;UBERON:0001007!5.47e-12!155;UBERON:0001555!5.47e-12!155;UBERON:0007026!5.47e-12!155;UBERON:0005911!9.86e-10!82;UBERON:0003102!3.21e-09!95;UBERON:0001004!8.14e-09!72;UBERON:0000077!1.46e-08!130;UBERON:0004921!2.04e-08!129;UBERON:0004185!2.04e-08!129;UBERON:0000161!7.07e-08!35;UBERON:0000065!1.31e-07!53;UBERON:0005153!1.62e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.01e-12;3!UBERON:0002031;4.01e-12;3!UBERON:0001911;7.42e-09;4!UBERON:0007196;1.70e-08;15!UBERON:0001558;1.70e-08;15!UBERON:0002185;2.01e-07;5!UBERON:0000365;2.05e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.59e-12,3;UBERON:0002031,4.59e-12,3;UBERON:0004119,7.41e-09,160;UBERON:0000925,7.41e-09,160;UBERON:0006595,7.41e-09,160;UBERON:0001911,8.51e-09,4;UBERON:0005333,8.51e-09,4;UBERON:0008425,8.51e-09,4;UBERON:0005311,8.51e-09,4;UBERON:0003102,9.91e-09,99;UBERON:0007196,1.87e-08,15;UBERON:0001558,1.87e-08,15;UBERON:0001004,1.57e-07,74;UBERON:0000365,1.67e-07,5;UBERON:0002185,2.17e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,3.48900583986214,1.09220686065086,1.05506791291381,0,0,2.01697543935533,0,0.730310090387373,0,0,0.408001382488506,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0.0821005894499457,0,0,0,0,3.67768489791571,2.409647350226,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0,0,0.130979075497713,2.91436230634034,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0.25326102332916,0,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0.515281080091258,0.37223371266318,0.337552664482532,0.389748020644795,0.252433774244115,0,0.323292113637624,0,0.201504196455281,0.169560592310488,1.73934767846967,0.818238361772504,0.860413786167011,0.121973706129595,0,0.116193942869518,0.414644220061482,0.756962552626885,0.36497735907583,0,1.92972281457866,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.435758888184812,0,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.368965315629341,0,2.74375713521564,4.49607013030478,5.83068039987459,2.96283024507295,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,0,0.234004265139238,0,0.93733833986777,4.36753533317035,1.84307626415102,1.16426079513703,4.35950907770943,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0.901029173531752,0,0.224262168690721,0.43596006883328,0.4400297149257,0.129271715757778,0,0,0,1.04007436911366,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.713715955188647,0.473107245101804,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0,0,0.925258162815933,1.42049380250502,0,1.55776328755086,1.51073491997947,0,7.01772646061497,9.48434186039732,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0.784349769176855,1.46139224653261,0,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.721287081534056,0,0,0,2.60024098414608,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,2.97512847649761,2.49847087574638,0.127612712494584,1.6185244936888,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0,1.06428319221179,0,0,0,0.699869440489966,1.25088746543166,4.02181365321472,7.62236894029258,0.564862804660675,1.72202149068492,13.47771805341,8.42517291719684,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.121360521749513,0,0.284136146806413,0.23874448473769,0.593929361665277,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0,1.4793148277115,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.461701551022782,0,0,0.269272933229316,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,1.56203764501618,0.195984794828755,0.0870592065804026,0,0.171986032471617,0,0,0,0.969890164884194,0,0.225980740780532,0.548167698587004,0.19871461170299,0,0.195551382734803,0.0801588202515337,2.34798294213288,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.998395002494955,0,0,0,0,0,0.315132729228895,0.412079291905832,0.13480708770837,0.196854963029498,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0.77380195455795,0,0.670869375198532,0.551639951094387,0.262272940674991,0,0,0,0,0,0,1.08599920350743,0,1.95952416065645,0,0,0.170388021785422,0,0.732761168390412,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0.302461847526478,0.621748802331122,0.147855149989634,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0.545545977607678,0,0,0.398095888698616,0.400027764663154,0.343395705182793,0.673498977531838,0,0,0,0.260994291965212,0.453411851024545,0,0,0.895444205407437,1.23520578864389,0.219284049578707,1.06013487567529,0.578742114812744,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0.699397538597222,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.11796972334774,1.28400018965175,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0.163771917510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|short_description=p@chr2:20402607..20402620,- | |short_description=p@chr2:20402607..20402620,- | ||
}} | }} |
Latest revision as of 05:13, 29 July 2015
Short description: | p@chr2:20402607..20402620, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20402607..20402620, - |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.65e-24 | 42 |
respiratory epithelial cell | 1.04e-21 | 13 |
endodermal cell | 4.11e-18 | 58 |
general ecto-epithelial cell | 3.48e-16 | 14 |
epithelial cell | 1.19e-14 | 253 |
epithelial cell of tracheobronchial tree | 1.42e-14 | 9 |
epithelial cell of lower respiratory tract | 1.42e-14 | 9 |
bronchial epithelial cell | 4.59e-12 | 3 |
duct epithelial cell | 6.87e-12 | 3 |
branched duct epithelial cell | 6.87e-12 | 3 |
tracheal epithelial cell | 6.87e-12 | 3 |
tracheoblast | 6.87e-12 | 3 |
stratified squamous epithelial cell | 1.73e-10 | 6 |
keratin accumulating cell | 1.73e-10 | 6 |
stratified epithelial cell | 1.73e-10 | 6 |
keratinizing barrier epithelial cell | 1.73e-10 | 6 |
epithelial fate stem cell | 1.73e-10 | 6 |
stratified epithelial stem cell | 1.73e-10 | 6 |
surface ectodermal cell | 1.73e-10 | 6 |
transitional epithelial cell | 2.72e-09 | 4 |
urothelial cell | 2.72e-09 | 4 |
mammary gland epithelial cell | 8.51e-09 | 4 |
corneal epithelial cell | 9.57e-09 | 2 |
embryonic cell | 8.64e-08 | 250 |
keratinocyte | 1.60e-07 | 5 |
amniotic epithelial cell | 1.70e-07 | 2 |
acinar cell | 4.86e-07 | 5 |
epidermal cell | 6.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.59e-12 | 3 |
epithelium of bronchus | 4.59e-12 | 3 |
endoderm-derived structure | 7.41e-09 | 160 |
endoderm | 7.41e-09 | 160 |
presumptive endoderm | 7.41e-09 | 160 |
mammary gland | 8.51e-09 | 4 |
mammary bud | 8.51e-09 | 4 |
mammary ridge | 8.51e-09 | 4 |
mammary placode | 8.51e-09 | 4 |
surface structure | 9.91e-09 | 99 |
tracheobronchial tree | 1.87e-08 | 15 |
lower respiratory tract | 1.87e-08 | 15 |
respiratory system | 1.57e-07 | 74 |
urothelium | 1.67e-07 | 5 |
bronchus | 2.17e-07 | 5 |