FFCP PHASE1:Hg19::chr2:215345586..215345590,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:215345586..215345590,- | |||
|coexpression_cluster_id=C89 | |coexpression_cluster_id=C89 | ||
|description=CAGE_peak_at_chr2:215345586..215345590,- | |description=CAGE_peak_at_chr2:215345586..215345590,- | ||
|id=chr2:215345586..215345590,- | |id=chr2:215345586..215345590,- | ||
|ontology_enrichment_celltype=CL:0000064!1.71e-09!3;CL:0005012!1.71e-09!3;CL:0000067!1.71e-09!3;CL:0002304!1.71e-09!3;CL:0002379!5.70e-08!1 | |ontology_enrichment_celltype=CL:0000064!1.71e-09!3;CL:0005012!1.71e-09!3;CL:0000067!1.71e-09!3;CL:0002304!1.71e-09!3;CL:0002379!5.70e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.52e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.07e-13,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!3.55e-08!1;DOID:3165!3.55e-08!1;DOID:0060121!3.55e-08!1;DOID:2438!3.55e-08!1;DOID:4418!3.55e-08!1;DOID:3620!5.70e-08!1;DOID:3565!5.70e-08!1 | |ontology_enrichment_disease=DOID:0060085!3.55e-08!1;DOID:3165!3.55e-08!1;DOID:0060121!3.55e-08!1;DOID:2438!3.55e-08!1;DOID:4418!3.55e-08!1;DOID:3620!5.70e-08!1;DOID:3565!5.70e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;6.30e-26;4!DOID:1325;1.78e-15;7!DOID:3904;1.78e-15;7!DOID:3905;2.31e-12;9!DOID:1324;5.74e-08;15!DOID:0050615;1.49e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.71e-09!3;UBERON:0001775!1.71e-09!3;UBERON:0000019!3.54e-08!19;UBERON:0000047!3.54e-08!19;UBERON:0004088!3.54e-08!19;UBERON:0003072!3.54e-08!19;UBERON:0003071!3.54e-08!19;UBERON:0004128!3.54e-08!19;UBERON:0000970!9.29e-08!20;UBERON:0006834!1.18e-07!1;UBERON:0002372!1.99e-07!1;UBERON:0001961!1.99e-07!1;UBERON:0001744!1.99e-07!1;UBERON:0001735!1.99e-07!1;UBERON:0002104!2.23e-07!21;UBERON:0001456!2.23e-07!21;UBERON:0000488!2.50e-07!4 | |ontology_enrichment_uberon=UBERON:0001778!1.71e-09!3;UBERON:0001775!1.71e-09!3;UBERON:0000019!3.54e-08!19;UBERON:0000047!3.54e-08!19;UBERON:0004088!3.54e-08!19;UBERON:0003072!3.54e-08!19;UBERON:0003071!3.54e-08!19;UBERON:0004128!3.54e-08!19;UBERON:0000970!9.29e-08!20;UBERON:0006834!1.18e-07!1;UBERON:0002372!1.99e-07!1;UBERON:0001961!1.99e-07!1;UBERON:0001744!1.99e-07!1;UBERON:0001735!1.99e-07!1;UBERON:0002104!2.23e-07!21;UBERON:0001456!2.23e-07!21;UBERON:0000488!2.50e-07!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:215345586..215345590,- | |short_description=p@chr2:215345586..215345590,- | ||
}} | }} |
Latest revision as of 05:57, 29 July 2015
Short description: | p@chr2:215345586..215345590, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:215345586..215345590, - |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.07e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |