FFCP PHASE1:Hg19::chr2:220284966..220284986,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1674 | |EntrezGene=entrezgene:1674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=2770 | |HGNC=HGNC:2770 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK022087_5end | |association_with_transcript=0bp_to_AK022087_5end | ||
|cluster_id=chr2:220284966..220284986,+ | |||
|coexpression_cluster_id=C305 | |coexpression_cluster_id=C305 | ||
|description=CAGE_peak_5_at_DES_5end | |description=CAGE_peak_5_at_DES_5end | ||
Revision as of 06:53, 29 July 2015
| Short description: | p5@DES |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_DES_5end |
| Coexpression cluster: | C305_heart_skeletal_smooth_left_bladder_penis_esophagus |
| Association with transcript: | 0bp_to_AK022087_5end |
| EntrezGene: | 1674 |
| HGNC: | 2770 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@DES |
|---|
0
5
10
15
20
25
30
35
40
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatic stellate cell | 6.88e-07 | 3 |
Showing 1 to 1 of 1 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.04e-18 | 114 |
| male genital duct | 6.95e-15 | 3 |
| internal male genitalia | 6.95e-15 | 3 |
| duct of male reproductive system | 2.75e-11 | 4 |
| muscle structure | 9.67e-11 | 2 |
| muscle organ | 9.67e-11 | 2 |
| throat | 2.29e-10 | 2 |
| large intestine | 2.62e-10 | 11 |
| primary circulatory organ | 3.22e-10 | 27 |
| compound organ | 2.98e-09 | 68 |
Showing 1 to 10 of 25 entries
