FFCP PHASE1:Hg19::chr2:227700623..227700643,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:227700623..227700643,- | |||
|description=CAGE_peak_at_chr2:227700623..227700643,- | |||
|id=chr2:227700623..227700643,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.81e-21;2!CL:0000242;2.81e-21;2!CL:0002328;3.16e-14;3!CL:0000312;4.49e-09;5!CL:0000240;1.06e-07;6!CL:0000311;1.06e-07;6!CL:0000079;1.06e-07;6!CL:0000237;1.06e-07;6!CL:0000236;1.92e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.38e-21,2;CL:0002328,4.73e-14,3;CL:0000312,3.39e-09,5;CL:0000240,8.37e-08,6;CL:0000311,8.37e-08,6;CL:0000079,8.37e-08,6;CL:0000237,8.37e-08,6;CL:0000036,8.37e-08,6;CL:0000357,8.37e-08,6;CL:0000114,8.37e-08,6;CL:0000236,5.80e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;1.06e-07;6!CL:0000114;1.06e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.40e-08!34;UBERON:0003528!3.40e-08!34;UBERON:0002780!5.08e-08!41;UBERON:0001890!5.08e-08!41;UBERON:0006240!5.08e-08!41;UBERON:0002791!6.02e-08!33;UBERON:0001049!7.18e-08!57;UBERON:0005068!7.18e-08!57;UBERON:0006241!7.18e-08!57;UBERON:0007135!7.18e-08!57;UBERON:0003080!1.30e-07!42;UBERON:0001893!1.76e-07!34;UBERON:0001869!2.98e-07!32;UBERON:0002616!3.13e-07!59;UBERON:0002346!6.32e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.01e-21;2!UBERON:0005058;1.01e-21;2!UBERON:0009113;1.01e-21;2!UBERON:0004815;3.16e-14;3!UBERON:0002031;3.16e-14;3!UBERON:0004177;2.99e-09;5!UBERON:0005057;2.99e-09;5!UBERON:0002185;6.69e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.73e-14,3;UBERON:0002031,4.73e-14,3;UBERON:0002370,2.30e-11,4;UBERON:0005058,2.30e-11,4;UBERON:0009113,2.30e-11,4;UBERON:0003295,2.30e-11,4;UBERON:0005562,2.30e-11,4;UBERON:0002185,8.50e-09,5;UBERON:0003351,7.32e-08,6;UBERON:0004177,7.46e-07,7;UBERON:0005057,7.46e-07,7 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.410623275218653,0.376627918784408,0.458480434487708,0.328402357799783,0.865818594450472,0,0,0.154816123316076,0.919421224478927,1.204823675113,1.10926203050036,0.387336002901508,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,1.09227722252426,0.889509253863555,0,0.800791974072025,1.72425731986345,1.32208974556972,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0,0,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0.520237390239513,0,0.276350017785848,0,0.444859689486181,0.802622484269139,0,0.453237370790265,0.383220493601921,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0.622422070799533,0.269421344139376,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.561803226808994,0.408308342509787,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0.900273288253207,0,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.482022059766964,0.441175890929576,0.435758888184812,0.71181185733329,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0.646882724578552,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0.343143423810856,0.413536052245775,0,0.106727557803444,0,0,0,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.276242966807689,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.438519753291869,1.8300481571743,0,0.328014645699706,0,0.206082023295445,1.28197250745681,1.07262349896764,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.255679882248303,0.0890320356467374,0,0.384380134730212,0.382838137483752,0,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471249609382746,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0.853702120180969,0,0.199579371432817,0.191505370132367,0.423347165447766,1.29848776109822,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.333698283423817,1.56310476321632,1.11362469558097,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0.242721043499027,0.780103689942349,0,0,0.296964680832639,0,0.994147647766298,0.703347082052564,0.779160935160341,0.988823245360557,0,0,0.828851746593443,0.755798243562828,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.341380344856499,0,0.236387681767936,0.344743373241465,0,0,0,0.482385754501632,0,0.774054819518572,0.295547618953547,0.438770794307945,0.10893846351899,0,0,0.113942055847001,0,0,0.325942115766024,0,0.183195186803725,0,0,0.31396051279005,0,0.225595660617181,0.588187602953219,0.167821586975843,0,0.317873157960757,0,0,0.141353071433941,0.865554558968364,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.468528891450678,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.823040347426423,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.6810170305578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| |||
|short_description=p@chr2:227700623..227700643,- | |||
}} |
Latest revision as of 07:19, 29 July 2015
Short description: | p@chr2:227700623..227700643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:227700623..227700643, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.38e-21 | 2 |
bronchial epithelial cell | 4.73e-14 | 3 |
keratinocyte | 3.39e-09 | 5 |
stratified squamous epithelial cell | 8.37e-08 | 6 |
keratin accumulating cell | 8.37e-08 | 6 |
stratified epithelial cell | 8.37e-08 | 6 |
keratinizing barrier epithelial cell | 8.37e-08 | 6 |
epithelial fate stem cell | 8.37e-08 | 6 |
stratified epithelial stem cell | 8.37e-08 | 6 |
surface ectodermal cell | 8.37e-08 | 6 |
B cell | 5.80e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.73e-14 | 3 |
epithelium of bronchus | 4.73e-14 | 3 |
thymus | 2.30e-11 | 4 |
hemolymphoid system gland | 2.30e-11 | 4 |
thymic region | 2.30e-11 | 4 |
pharyngeal gland | 2.30e-11 | 4 |
thymus primordium | 2.30e-11 | 4 |
bronchus | 8.50e-09 | 5 |
pharyngeal epithelium | 7.32e-08 | 6 |
hemopoietic organ | 7.46e-07 | 7 |
immune organ | 7.46e-07 | 7 |