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FFCP PHASE1:Hg19::chr2:242750092..242750115,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=
|HGNC=
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-10bp_to_D55640_5end
|association_with_transcript=-10bp_to_D55640_5end
|cluster_id=chr2:242750092..242750115,-
|coexpression_cluster_id=C55
|coexpression_cluster_id=C55
|description=CAGE_peak_1_at_D55640_5end
|description=CAGE_peak_1_at_D55640_5end
|id=chr2:242750092..242750115,-
|id=chr2:242750092..242750115,-
|ontology_enrichment_celltype=CL:0000181!1.15e-27!12;CL:0000417!1.15e-27!12;CL:0000668!1.15e-27!12;CL:0000414!1.15e-27!12;CL:0000412!1.15e-27!12;CL:0000182!1.15e-27!12;CL:0000223!5.11e-07!59
|ontology_enrichment_celltype=CL:0000181!1.15e-27!12;CL:0000417!1.15e-27!12;CL:0000668!1.15e-27!12;CL:0000414!1.15e-27!12;CL:0000412!1.15e-27!12;CL:0000182!1.15e-27!12;CL:0000223!5.11e-07!59
|ontology_enrichment_celltype_v019=CL:0000182;4.93e-53;12
|ontology_enrichment_celltype_v019_2=CL:0000182,4.61e-53,12;CL:0000223,1.24e-11,58
|ontology_enrichment_development_v019=UBERON:0004161;9.27e-58;11!UBERON:0009497;4.92e-49;13!UBERON:0001041;9.03e-22;30!UBERON:0003104;7.27e-21;31!CL:0000223;1.38e-07;58
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:7;1.08e-15;39
|ontology_enrichment_disease_v019_2=DOID:7,6.08e-17,39
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|short_description=p1@D55640
|short_description=p1@D55640
}}
}}

Latest revision as of 08:44, 29 July 2015

Short description:p1@D55640
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_D55640_5end
Coexpression cluster:C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma
Association with transcript: -10bp_to_D55640_5end
EntrezGene:NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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