FFCP PHASE1:Hg19::chr2:27717127..27717132,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:27717127..27717132,- | |||
|coexpression_cluster_id=C591 | |||
|description=CAGE_peak_at_chr2:27717127..27717132,- | |description=CAGE_peak_at_chr2:27717127..27717132,- | ||
|id=chr2:27717127..27717132,- | |id=chr2:27717127..27717132,- | ||
|ontology_enrichment_celltype=CL:0000136!6.17e-24!15;CL:0001014!4.31e-16!2;CL:0001016!4.31e-16!2;CL:0002174!7.18e-09!1;CL:0000501!7.18e-09!1;CL:0000325!1.03e-08!39;CL:0000453!5.91e-07!5 | |ontology_enrichment_celltype=CL:0000136!6.17e-24!15;CL:0001014!4.31e-16!2;CL:0001016!4.31e-16!2;CL:0002174!7.18e-09!1;CL:0000501!7.18e-09!1;CL:0000325!1.03e-08!39;CL:0000453!5.91e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.42e-25;12!CL:0002521;1.85e-12;3!CL:0002592;3.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.52e-25,12;CL:0002521,1.85e-12,3;CL:0002592,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002148!1.33e-15!2;UBERON:0009662!1.33e-15!2;UBERON:0000988!1.03e-10!3;UBERON:0006331!1.03e-10!3;UBERON:0002336!1.05e-08!1;UBERON:0001018!1.05e-08!1;UBERON:0002473!1.05e-08!1;UBERON:0005340!1.05e-08!1;UBERON:0002316!1.05e-08!1;UBERON:0003544!1.05e-08!1;UBERON:0001020!1.05e-08!1;UBERON:0005970!1.05e-08!1;UBERON:0002437!1.05e-08!1;UBERON:0009497!1.66e-07!25;UBERON:0000015!1.66e-07!25;UBERON:0002423!1.66e-07!25;UBERON:0006235!1.66e-07!25;UBERON:0004161!1.66e-07!25;UBERON:0005057!3.58e-07!26;UBERON:0002417!9.02e-07!61;UBERON:0000916!9.02e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.18e-28;19!UBERON:0006925;3.18e-28;19!UBERON:0002423;1.24e-21;25!UBERON:0002365;3.83e-18;31!UBERON:0002330;3.83e-18;31!UBERON:0002368;1.30e-14;33!UBERON:0002190;1.85e-12;3!UBERON:0000949;2.84e-12;43!UBERON:0003498;3.06e-12;3!UBERON:0005985;3.06e-12;3!UBERON:0001621;3.06e-12;3!UBERON:0005172;4.66e-09;52!UBERON:0005173;4.66e-09;52!UBERON:0002072;5.35e-08;5!UBERON:0002530;7.78e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.30e-28,19;UBERON:0006925,3.30e-28,19;UBERON:0008836,3.30e-28,19;UBERON:0008835,1.82e-24,22;UBERON:0003894,1.82e-24,22;UBERON:0009854,1.95e-23,23;UBERON:0007499,1.28e-21,25;UBERON:0009497,1.28e-21,25;UBERON:0000015,1.28e-21,25;UBERON:0002423,1.28e-21,25;UBERON:0006235,1.28e-21,25;UBERON:0004161,1.28e-21,25;UBERON:0009856,8.14e-21,26;UBERON:0002365,1.43e-17,31;UBERON:0002330,1.43e-17,31;UBERON:0002368,1.22e-15,35;UBERON:0002190,1.85e-12,3;UBERON:0000949,2.66e-12,45;UBERON:0001621,2.89e-12,3;UBERON:0003929,2.40e-10,54;UBERON:0005172,2.40e-10,54;UBERON:0005173,2.40e-10,54;UBERON:0002530,1.63e-09,59;UBERON:0002417,2.30e-09,60;UBERON:0000916,2.30e-09,60;UBERON:0002072,5.35e-08,5;UBERON:0003498,7.01e-08,5;UBERON:0005985,7.01e-08,5;UBERON:0003914,1.78e-07,117;UBERON:0005256,3.50e-07,122;UBERON:0005911,5.54e-07,82 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,3.9313088667105,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,3.9313088667105,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr2:27717127..27717132,- | |short_description=p@chr2:27717127..27717132,- | ||
}} | }} |
Latest revision as of 09:14, 29 July 2015
Short description: | p@chr2:27717127..27717132, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:27717127..27717132, - |
Coexpression cluster: | C591_Adipocyte_Hair_heart_left_Osteoblast_skin_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.52e-25 | 12 |
subcutaneous fat cell | 1.85e-12 | 3 |
smooth muscle cell of the coronary artery | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.30e-28 | 19 |
digestive gland | 3.30e-28 | 19 |
liver bud | 3.30e-28 | 19 |
hepatic diverticulum | 1.82e-24 | 22 |
liver primordium | 1.82e-24 | 22 |
digestive tract diverticulum | 1.95e-23 | 23 |
epithelial sac | 1.28e-21 | 25 |
epithelium of foregut-midgut junction | 1.28e-21 | 25 |
anatomical boundary | 1.28e-21 | 25 |
hepatobiliary system | 1.28e-21 | 25 |
foregut-midgut junction | 1.28e-21 | 25 |
septum transversum | 1.28e-21 | 25 |
sac | 8.14e-21 | 26 |
exocrine gland | 1.43e-17 | 31 |
exocrine system | 1.43e-17 | 31 |
endocrine gland | 1.22e-15 | 35 |
subcutaneous adipose tissue | 1.85e-12 | 3 |
endocrine system | 2.66e-12 | 45 |
coronary artery | 2.89e-12 | 3 |
gut epithelium | 2.40e-10 | 54 |
abdomen element | 2.40e-10 | 54 |
abdominal segment element | 2.40e-10 | 54 |
gland | 1.63e-09 | 59 |
abdominal segment of trunk | 2.30e-09 | 60 |
abdomen | 2.30e-09 | 60 |
hypodermis | 5.35e-08 | 5 |
heart blood vessel | 7.01e-08 | 5 |
coronary vessel | 7.01e-08 | 5 |
epithelial tube | 1.78e-07 | 117 |
trunk mesenchyme | 3.50e-07 | 122 |
endo-epithelium | 5.54e-07 | 82 |