FFCP PHASE1:Hg19::chr2:34902620..34902625,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENST00000423663_5end | |||
|cluster_id=chr2:34902620..34902625,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_1_at_ENST00000423663_5end | |||
|id=chr2:34902620..34902625,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.00e-18!3;CL:0000650!3.82e-09!3;CL:1000618!3.82e-09!3;CL:1001318!3.82e-09!3;CL:0002173!3.82e-09!3;CL:1000500!3.82e-09!3;CL:0000313!6.59e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000313;4.72e-17;1!CL:0000159;3.43e-09;2!CL:0000650;8.09e-09;2!CL:1000500;8.09e-09;2!CL:1000618;8.09e-09;2!CL:1001318;8.09e-09;2!CL:0002173;8.09e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.72e-17,1;CL:0000159,3.43e-09,2;CL:0000650,7.49e-09,2;CL:1000500,7.49e-09,2;CL:1000618,7.49e-09,2;CL:1001318,7.49e-09,2;CL:0002173,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.65e-16;1!UBERON:0003918;3.65e-07;10!UBERON:0007687;3.65e-07;10!UBERON:0005795;4.66e-07;10 | |||
|ontology_enrichment_disease=DOID:2152!6.59e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;4.72e-17;1!DOID:4468;4.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.72e-17,1;DOID:4468,4.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.00e-18!3;UBERON:0000920!1.00e-18!3;UBERON:0003124!3.34e-14!7;UBERON:0005631!1.18e-10!14;UBERON:0000158!1.18e-10!14;UBERON:0002113!2.68e-10!27;UBERON:0003918!2.68e-10!27;UBERON:0005095!2.68e-10!27;UBERON:0007687!2.68e-10!27;UBERON:0005172!2.88e-09!55;UBERON:0005173!2.88e-09!55;UBERON:0003567!3.82e-09!3;UBERON:0003838!3.82e-09!3;UBERON:0005169!3.82e-09!3;UBERON:0002321!3.82e-09!3;UBERON:0005215!3.82e-09!3;UBERON:0002303!3.82e-09!3;UBERON:0002319!3.82e-09!3;UBERON:0000489!1.49e-08!32;UBERON:0002417!3.46e-08!61;UBERON:0000916!3.46e-08!61;UBERON:0004911!6.59e-08!1;UBERON:0006834!8.54e-08!1;UBERON:0001301!2.66e-07!1;UBERON:0003887!6.05e-07!21;UBERON:0005795!7.24e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;4.72e-17;1!UBERON:0006834;8.86e-17;1!UBERON:0004909;3.43e-09;2!UBERON:0003567;8.09e-09;2!UBERON:0003838;8.09e-09;2!UBERON:0003586;8.09e-09;2!UBERON:0005169;8.09e-09;2!UBERON:0002321;8.09e-09;2!UBERON:0005215;8.09e-09;2!UBERON:0002303;8.09e-09;2!UBERON:0002319;8.09e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,4.72e-17,1;UBERON:0006834,8.86e-17,1;UBERON:0003124,1.18e-09,7;UBERON:0004909,3.43e-09,2;UBERON:0003567,7.49e-09,2;UBERON:0003838,7.49e-09,2;UBERON:0003586,7.49e-09,2;UBERON:0005169,7.49e-09,2;UBERON:0002321,7.49e-09,2;UBERON:0005215,7.49e-09,2;UBERON:0002303,7.49e-09,2;UBERON:0002319,7.49e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.492603536699674,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25681995367566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0.638002319463839,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,14.6909527343233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.6422124758644,13.6381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04993214870357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48366636455389,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.2271401437376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,5.13414065568039,0.813792356631477,0,0,0 | |||
|short_description=p1@ENST00000423663 | |||
}} |
Latest revision as of 09:43, 29 July 2015
Short description: | p1@ENST00000423663 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000423663_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | -20bp_to_ENST00000423663_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.72e-17 | 1 |
seromucus secreting cell | 3.43e-09 | 2 |
mesangial cell | 7.49e-09 | 2 |
kidney interstitial cell | 7.49e-09 | 2 |
juxtaglomerular complex cell | 7.49e-09 | 2 |
renal interstitial pericyte | 7.49e-09 | 2 |
extraglomerular mesangial cell | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 4.72e-17 | 1 |
uterus or analog | 8.86e-17 | 1 |
chorion | 1.18e-09 | 7 |
epithelium of gonad | 3.43e-09 | 2 |
abdomen connective tissue | 7.49e-09 | 2 |
abdominal segment connective tissue | 7.49e-09 | 2 |
trunk connective tissue | 7.49e-09 | 2 |
interstitial tissue | 7.49e-09 | 2 |
extraglomerular mesangium | 7.49e-09 | 2 |
kidney interstitium | 7.49e-09 | 2 |
juxtaglomerular apparatus | 7.49e-09 | 2 |
mesangium | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.72e-17 | 1 |
clear cell adenocarcinoma | 4.02e-09 | 2 |