FFCP PHASE1:Hg19::chr2:45419385..45419401,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000427020_5end | |association_with_transcript=2bp_to_ENST00000427020_5end | ||
|cluster_id=chr2:45419385..45419401,- | |||
|coexpression_cluster_id=C397 | |coexpression_cluster_id=C397 | ||
|description=CAGE_peak_1_at_ENST00000427020_5end | |description=CAGE_peak_1_at_ENST00000427020_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000515!5.51e-22!4;CL:0000188!9.78e-15!9;CL:0000569!3.23e-12!4;CL:0000011!3.23e-12!4;CL:0000680!4.09e-09!57;CL:0000056!4.09e-09!57;CL:0000355!4.09e-09!57;CL:0002622!1.11e-07!3;CL:0002242!6.23e-07!1;CL:0000228!6.23e-07!1;CL:0002372!6.23e-07!1 | |ontology_enrichment_celltype=CL:0000515!5.51e-22!4;CL:0000188!9.78e-15!9;CL:0000569!3.23e-12!4;CL:0000011!3.23e-12!4;CL:0000680!4.09e-09!57;CL:0000056!4.09e-09!57;CL:0000355!4.09e-09!57;CL:0002622!1.11e-07!3;CL:0002242!6.23e-07!1;CL:0000228!6.23e-07!1;CL:0002372!6.23e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000056;8.86e-56;4!CL:0000515;1.27e-33;3!CL:0000680;2.71e-32;7!CL:0000228;4.06e-26;1!CL:0002372;4.06e-26;1!CL:0000188;2.27e-25;9!CL:0002321;1.63e-15;15!CL:0000737;1.54e-07;4 | |ontology_enrichment_celltype_v019=CL:0000056;8.86e-56;4!CL:0000515;1.27e-33;3!CL:0000680;2.71e-32;7!CL:0000228;4.06e-26;1!CL:0002372;4.06e-26;1!CL:0000188;2.27e-25;9!CL:0002321;1.63e-15;15!CL:0000737;1.54e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.06e-56,4;CL:0000228,3.58e-26,1;CL:0002372,3.58e-26,1;CL:0000188,2.47e-25,9;CL:0000680,6.80e-11,58;CL:0000056,6.80e-11,58;CL:0000355,6.80e-11,58;CL:0000737,1.49e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.86e-56;4!CL:0000355;1.85e-09;58 | |ontology_enrichment_development_v019=CL:0000515;8.86e-56;4!CL:0000355;1.85e-09;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.22e-08!61;UBERON:0002036!2.22e-08!61;UBERON:0003082!2.22e-08!61;UBERON:0002385!4.76e-08!63;UBERON:0001015!4.76e-08!63;UBERON:0000383!4.76e-08!63;UBERON:0004290!4.87e-07!70;UBERON:0000914!9.83e-07!83;UBERON:0002329!9.83e-07!83;UBERON:0003077!9.83e-07!83;UBERON:0003059!9.83e-07!83;UBERON:0007282!9.83e-07!83;UBERON:0009618!9.83e-07!83;UBERON:0007285!9.83e-07!83 | |ontology_enrichment_uberon=UBERON:0001134!2.22e-08!61;UBERON:0002036!2.22e-08!61;UBERON:0003082!2.22e-08!61;UBERON:0002385!4.76e-08!63;UBERON:0001015!4.76e-08!63;UBERON:0000383!4.76e-08!63;UBERON:0004290!4.87e-07!70;UBERON:0000914!9.83e-07!83;UBERON:0002329!9.83e-07!83;UBERON:0003077!9.83e-07!83;UBERON:0003059!9.83e-07!83;UBERON:0007282!9.83e-07!83;UBERON:0009618!9.83e-07!83;UBERON:0007285!9.83e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.32e-38;16!UBERON:0002036;1.32e-38;16!UBERON:0002385;2.29e-19;31!UBERON:0001015;2.29e-19;31!UBERON:0000383;2.29e-19;31!UBERON:0002119;1.40e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001134;1.32e-38;16!UBERON:0002036;1.32e-38;16!UBERON:0002385;2.29e-19;31!UBERON:0001015;2.29e-19;31!UBERON:0000383;2.29e-19;31!UBERON:0002119;1.40e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.32e-10,62;UBERON:0002036,3.32e-10,62;UBERON:0003082,3.32e-10,62;UBERON:0002385,6.81e-10,64;UBERON:0001015,6.81e-10,64;UBERON:0000383,6.81e-10,64;UBERON:0002329,6.15e-09,71;UBERON:0003059,6.15e-09,71;UBERON:0007282,6.15e-09,71;UBERON:0004290,6.15e-09,71;UBERON:0009618,6.15e-09,71;UBERON:0003077,8.13e-09,72;UBERON:0007285,8.13e-09,72;UBERON:0007524,1.07e-08,73;UBERON:0007503,3.76e-08,78;UBERON:0000486,1.14e-07,83;UBERON:0002119,1.40e-07,4 | |||
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|short_description=p1@ENST00000427020 | |short_description=p1@ENST00000427020 | ||
}} | }} |
Latest revision as of 10:26, 29 July 2015
Short description: | p1@ENST00000427020 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000427020_5end |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | 2bp_to_ENST00000427020_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.06e-56 | 4 |
multinucleate cell | 3.58e-26 | 1 |
myotube | 3.58e-26 | 1 |
cell of skeletal muscle | 2.47e-25 | 9 |
muscle precursor cell | 6.80e-11 | 58 |
myoblast | 6.80e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.80e-11 | 58 |
striated muscle cell | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.32e-10 | 62 |
striated muscle tissue | 3.32e-10 | 62 |
myotome | 3.32e-10 | 62 |
muscle tissue | 6.81e-10 | 64 |
musculature | 6.81e-10 | 64 |
musculature of body | 6.81e-10 | 64 |
somite | 6.15e-09 | 71 |
presomitic mesoderm | 6.15e-09 | 71 |
presumptive segmental plate | 6.15e-09 | 71 |
dermomyotome | 6.15e-09 | 71 |
trunk paraxial mesoderm | 6.15e-09 | 71 |
paraxial mesoderm | 8.13e-09 | 72 |
presumptive paraxial mesoderm | 8.13e-09 | 72 |
dense mesenchyme tissue | 1.07e-08 | 73 |
epithelial vesicle | 3.76e-08 | 78 |
multilaminar epithelium | 1.14e-07 | 83 |
left ovary | 1.40e-07 | 4 |