FFCP PHASE1:Hg19::chr2:46607364..46607410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:46607364..46607410,+ | |||
|coexpression_cluster_id=C2700 | |||
|description=CAGE_peak_at_chr2:46607364..46607410,+ | |description=CAGE_peak_at_chr2:46607364..46607410,+ | ||
|id=chr2:46607364..46607410,+ | |id=chr2:46607364..46607410,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.92e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.13e-10,19;CL:0002541,7.45e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.21e-13!286;UBERON:0004111!1.90e-11!241;UBERON:0000468!1.70e-10!659;UBERON:0000062!3.77e-10!511;UBERON:0000483!4.86e-10!309;UBERON:0000467!5.37e-10!625;UBERON:0000480!7.97e-10!626;UBERON:0000119!8.03e-10!312;UBERON:0000064!2.33e-08!219;UBERON:0007023!4.84e-08!115;UBERON:0005631!1.99e-07!14;UBERON:0000158!1.99e-07!14;UBERON:0004923!2.01e-07!57;UBERON:0000025!2.35e-07!194;UBERON:0000481!7.75e-07!347;UBERON:0000475!8.39e-07!365 | |ontology_enrichment_uberon=UBERON:0000477!2.21e-13!286;UBERON:0004111!1.90e-11!241;UBERON:0000468!1.70e-10!659;UBERON:0000062!3.77e-10!511;UBERON:0000483!4.86e-10!309;UBERON:0000467!5.37e-10!625;UBERON:0000480!7.97e-10!626;UBERON:0000119!8.03e-10!312;UBERON:0000064!2.33e-08!219;UBERON:0007023!4.84e-08!115;UBERON:0005631!1.99e-07!14;UBERON:0000158!1.99e-07!14;UBERON:0004923!2.01e-07!57;UBERON:0000025!2.35e-07!194;UBERON:0000481!7.75e-07!347;UBERON:0000475!8.39e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.79e-13;10!UBERON:0000158;4.79e-13;10!UBERON:0003688;9.43e-10;6!UBERON:0002358;9.43e-10;6!UBERON:0003684;9.43e-10;6!UBERON:0001178;9.43e-10;6!UBERON:0000478;1.16e-09;24!UBERON:0004457;2.49e-08;9!UBERON:0000042;2.49e-08;9!UBERON:0000305;3.05e-08;7!UBERON:0004151;6.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.00e-15,14;UBERON:0000158,1.00e-15,14;UBERON:0004923,5.70e-10,66;UBERON:0003688,1.31e-09,6;UBERON:0002358,1.31e-09,6;UBERON:0003684,1.31e-09,6;UBERON:0001178,1.31e-09,6;UBERON:0000478,1.52e-09,24;UBERON:0003124,1.68e-09,7;UBERON:0000305,6.77e-08,7;UBERON:0002417,1.53e-07,60;UBERON:0000916,1.53e-07,60;UBERON:0004151,7.18e-07,3;UBERON:0000920,7.45e-07,3;UBERON:0004871,8.14e-07,8;UBERON:0001280,9.36e-07,3;UBERON:0004647,9.36e-07,3;UBERON:0005171,9.36e-07,3 | |||
|phase1_expression=0.908391896352783,5.1384125733836,1.26858963686374,2.00146596706261,1.78784437770915,1.74467704820074,0,0,0.522371256399677,0.491467873003018,0,1.31064823278103,1.31883489114227,0.247532705920093,0.331397375727916,1.34465029290355,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0.383587685530591,1.44575660953827,1.00267582127178,1.88300474649071,0,0.486634870302636,0.472674085820339,1.33037638477538,0.614843499851882,0.72038491523742,0.728590576585084,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0.860234595106124,0,0,1.25849830862972,3.57653454522088,0.417989933073621,1.29208379584664,1.42306505074684,2.34304428935269,0.805658634218294,0,3.41686880567437,0,2.43042584364528,0.446498641420399,0.673588117878509,0.675668882899933,0,0.949265659568129,0.366403487860815,0,0,0.872188104285069,0,0.506522046658319,0.529636723252875,0.573673241497627,0.709336764396714,0.560677600142307,2.1349799145941,0.74000264525148,0.311211035399766,1.0776853765575,1.47115712802113,0.454072282934794,0,0.468642863667593,0.624320153660641,0,0.149448680551801,0,0,0,0.408308342509787,0.368502951935304,0.413303124703062,3.56400857184616,7.17074094907815,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,2.55404700141215,0.340296549480063,0.179389635688862,0.85422955527427,0.847727604638247,0.300091096084402,0.309157587715317,0,0.930584281657949,0,0.68205903612839,0.252433774244115,0.828449087780694,0.80823028409406,0,0.705264687593482,1.01736355386293,0,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0.404493924480493,0.196221465125346,0.38474715694639,5.16708818237254,4.20725321410337,0,1.47008711385542,2.53510069643662,1.96565443335525,2.36315962672562,0,0.122988438543114,0.686271241194102,0.439001141634502,0,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0.761016608938393,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0,0.383382679165211,0,0.264145302039678,0.621984346622316,0.144119953416961,0,0.063497894292169,0,1.17217447210047,1.71072446022705,0,0.600686115687835,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0.845302752556,1.32969058292435,1.04007436911366,0,0,0,0.714889968290738,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0.399891964728228,0,0.502257091432126,2.10833939483032,0,2.29723871668228,0,0,1.84928690295345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,2.70362119990049,4.81758269752337,2.05013139544115,1.05427273493442,0,0,0,0.664225598535437,0,1.30325421702124,0.195801157462741,0,0,0,0.106727557803444,0,1.66435439510497,1.20956117331872,0.496215615637554,0,1.40330047216537,1.28139149255701,1.02341449813341,1.60853921143608,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.348631135379878,0.362578348774867,2.00506470303285,0.828728900423067,0.803701137152247,0.546273504020151,2.75361271414791,0.451199612907412,0,0,0,0,5.68666920354483,1.36074964221213,0.647747748306418,4.62681758070868,0,0,0,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0.984043937099117,1.30151357865721,0.9273691048295,0,0,0.574265537996172,1.95018073810956,0,0.386682873168488,0.154048617114644,0.307007349452259,0,0,0.435050081742686,0.170453254832202,0.178064071293475,0.991709492165869,0.576570202095319,0,0.708104465988849,1.39453664789186,0,0,0,0,0,0.55597265731176,0.143124886741991,0.372158369359667,0.316379424718726,2.47819252100972,0.255897791311334,0.855877976067841,0.318203247925937,0,1.2591072030832,1.09814811894422,0.706874414074119,0.606547444719948,1.58510321173008,0,0.48763373908959,0,2.11300293513511,0.545999645631943,2.54529777516683,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,1.68886108238131,0.987884678879706,0,0,0.288666338176536,0,1.08890984861323,1.31801321087491,0.86101074534246,0,0.886860307073351,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0.66614393599564,0,0.18714054040822,1.46508179271894,0,0,0.284136146806413,0.47748896947538,2.37571744666111,1.22864280839693,0,0.562677665642051,1.11308705022906,0.824019371133798,0,2.19172787076177,0.828851746593443,0.251932747854276,0,0,1.55519793830904,0,0.358042349351218,0,0.690503839458535,0,1.11136990144637,0,0.649376687132959,0,0,0,2.8999983017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| ||
|short_description=p@chr2:46607364..46607410,+ | |short_description=p@chr2:46607364..46607410,+ | ||
}} | }} |
Latest revision as of 10:28, 29 July 2015
Short description: | p@chr2:46607364..46607410, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46607364..46607410, + |
Coexpression cluster: | C2700_chorionic_lung_Fibroblast_Olfactory_Renal_Endothelial_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.13e-10 | 19 |
chorionic membrane mesenchymal stem cell | 7.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.00e-15 | 14 |
membranous layer | 1.00e-15 | 14 |
organ component layer | 5.70e-10 | 66 |
omentum | 1.31e-09 | 6 |
peritoneum | 1.31e-09 | 6 |
abdominal cavity | 1.31e-09 | 6 |
visceral peritoneum | 1.31e-09 | 6 |
extraembryonic structure | 1.52e-09 | 24 |
chorion | 1.68e-09 | 7 |
amnion | 6.77e-08 | 7 |
abdominal segment of trunk | 1.53e-07 | 60 |
abdomen | 1.53e-07 | 60 |
cardiac chamber | 7.18e-07 | 3 |
egg chorion | 7.45e-07 | 3 |
somatic layer of lateral plate mesoderm | 8.14e-07 | 8 |
liver parenchyma | 9.36e-07 | 3 |
liver lobule | 9.36e-07 | 3 |
hepatic duct | 9.36e-07 | 3 |