FFCP PHASE1:Hg19::chr2:53859899..53859908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:53859899..53859908,- | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_at_chr2:53859899..53859908,- | |description=CAGE_peak_at_chr2:53859899..53859908,- | ||
|id=chr2:53859899..53859908,- | |id=chr2:53859899..53859908,- | ||
|ontology_enrichment_celltype=CL:0000062!2.70e-08!11;CL:0000375!2.70e-08!11;CL:0000335!2.70e-08!11;CL:0000197!4.52e-07!6;CL:0000098!4.52e-07!6;CL:0002167!4.52e-07!6 | |ontology_enrichment_celltype=CL:0000062!2.70e-08!11;CL:0000375!2.70e-08!11;CL:0000335!2.70e-08!11;CL:0000197!4.52e-07!6;CL:0000098!4.52e-07!6;CL:0002167!4.52e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000062;8.51e-50;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.35e-41,11;CL:0000375,5.35e-41,11;CL:0000335,5.35e-41,11 | |||
|ontology_enrichment_development_v019=CL:0000335;5.73e-41;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;9.39e-14;4!DOID:1325;1.96e-08;7!DOID:3904;1.96e-08;7!DOID:3905;7.69e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.00e-13,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000200!6.92e-24!6;UBERON:0002771!5.81e-13!3;UBERON:0002780!1.37e-12!41;UBERON:0001890!1.37e-12!41;UBERON:0006240!1.37e-12!41;UBERON:0001869!1.78e-12!32;UBERON:0003080!2.84e-12!42;UBERON:0001893!1.01e-11!34;UBERON:0002616!7.92e-11!59;UBERON:0007029!9.84e-11!1;UBERON:0001282!3.29e-10!1;UBERON:0009842!3.29e-10!1;UBERON:0003704!3.29e-10!1;UBERON:0001171!3.29e-10!1;UBERON:0001172!3.29e-10!1;UBERON:0007190!3.61e-10!1;UBERON:0002581!4.33e-10!1;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1;UBERON:0002791!5.30e-09!33;UBERON:0000955!5.87e-09!69;UBERON:0006238!5.87e-09!69;UBERON:0001049!7.59e-09!57;UBERON:0005068!7.59e-09!57;UBERON:0006241!7.59e-09!57;UBERON:0007135!7.59e-09!57;UBERON:0002020!9.87e-09!34;UBERON:0003528!9.87e-09!34;UBERON:0003056!3.27e-08!61;UBERON:0001017!2.23e-07!82;UBERON:0001950!5.26e-07!20;UBERON:0005743!5.49e-07!86 | |ontology_enrichment_uberon=UBERON:0000200!6.92e-24!6;UBERON:0002771!5.81e-13!3;UBERON:0002780!1.37e-12!41;UBERON:0001890!1.37e-12!41;UBERON:0006240!1.37e-12!41;UBERON:0001869!1.78e-12!32;UBERON:0003080!2.84e-12!42;UBERON:0001893!1.01e-11!34;UBERON:0002616!7.92e-11!59;UBERON:0007029!9.84e-11!1;UBERON:0001282!3.29e-10!1;UBERON:0009842!3.29e-10!1;UBERON:0003704!3.29e-10!1;UBERON:0001171!3.29e-10!1;UBERON:0001172!3.29e-10!1;UBERON:0007190!3.61e-10!1;UBERON:0002581!4.33e-10!1;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1;UBERON:0002791!5.30e-09!33;UBERON:0000955!5.87e-09!69;UBERON:0006238!5.87e-09!69;UBERON:0001049!7.59e-09!57;UBERON:0005068!7.59e-09!57;UBERON:0006241!7.59e-09!57;UBERON:0007135!7.59e-09!57;UBERON:0002020!9.87e-09!34;UBERON:0003528!9.87e-09!34;UBERON:0003056!3.27e-08!61;UBERON:0001017!2.23e-07!82;UBERON:0001950!5.26e-07!20;UBERON:0005743!5.49e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.73e-25;18!UBERON:0004765;5.66e-18;26!UBERON:0001434;2.72e-13;36 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:53859899..53859908,- | |short_description=p@chr2:53859899..53859908,- | ||
}} | }} |
Latest revision as of 10:45, 29 July 2015
Short description: | p@chr2:53859899..53859908, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:53859899..53859908, - |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.35e-41 | 11 |
osteoprogenitor cell | 5.35e-41 | 11 |
mesenchyme condensation cell | 5.35e-41 | 11 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.00e-13 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |