FFCP PHASE1:Hg19::chr2:89156976..89157016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=101bp_to_CU688247,CU689025,CU689831,CU689833,CU689835,CU691143_5end | |association_with_transcript=101bp_to_CU688247,CU689025,CU689831,CU689833,CU689835,CU691143_5end | ||
|cluster_id=chr2:89156976..89157016,+ | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_4_at_CU688247_5end,CAGE_peak_4_at_CU689025_5end,CAGE_peak_4_at_CU689831_5end,CAGE_peak_4_at_CU689833_5end,CAGE_peak_4_at_CU689835_5end,CAGE_peak_4_at_CU691143_5end | |description=CAGE_peak_4_at_CU688247_5end,CAGE_peak_4_at_CU689025_5end,CAGE_peak_4_at_CU689831_5end,CAGE_peak_4_at_CU689833_5end,CAGE_peak_4_at_CU689835_5end,CAGE_peak_4_at_CU691143_5end | ||
|id=chr2:89156976..89157016,+ | |id=chr2:89156976..89157016,+ | ||
|ontology_enrichment_celltype=CL:0000236!1.09e-33!14;CL:0000945!1.57e-31!24;CL:0000826!1.57e-31!24;CL:0000838!4.71e-12!52;CL:0000542!9.63e-12!53;CL:0000051!9.63e-12!53;CL:0000842!7.82e-08!3;CL:0000785!7.65e-07!2;CL:0000955!7.65e-07!2;CL:0000818!7.65e-07!2;CL:0000954!7.65e-07!2;CL:0000816!7.65e-07!2 | |ontology_enrichment_celltype=CL:0000236!1.09e-33!14;CL:0000945!1.57e-31!24;CL:0000826!1.57e-31!24;CL:0000838!4.71e-12!52;CL:0000542!9.63e-12!53;CL:0000051!9.63e-12!53;CL:0000842!7.82e-08!3;CL:0000785!7.65e-07!2;CL:0000955!7.65e-07!2;CL:0000818!7.65e-07!2;CL:0000954!7.65e-07!2;CL:0000816!7.65e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.69e-49;24!CL:0000236;8.95e-47;13!CL:0000542;1.65e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.42e-51,14;CL:0000945,6.55e-49,24;CL:0000826,6.55e-49,24;CL:0000838,2.26e-20,52;CL:0000542,6.54e-20,53;CL:0000051,6.54e-20,53;CL:0000785,1.15e-09,2;CL:0000955,1.15e-09,2;CL:0000818,1.15e-09,2;CL:0000954,1.15e-09,2;CL:0000816,1.15e-09,2;CL:0002087,5.09e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.65e-14;53!UBERON:0006965;1.15e-09;2!CL:0000954;1.45e-09;2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.16e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.95e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-31!115;UBERON:0000178!9.70e-13!15;UBERON:0000179!9.70e-13!15;UBERON:0000463!9.70e-13!15 | |ontology_enrichment_uberon=UBERON:0007023!1.93e-31!115;UBERON:0000178!9.70e-13!15;UBERON:0000179!9.70e-13!15;UBERON:0000463!9.70e-13!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-09;15!UBERON:0000179;1.90e-09;15!UBERON:0000463;1.90e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.09e-23,114;UBERON:0000178,2.49e-09,15;UBERON:0000179,2.49e-09,15;UBERON:0000463,2.49e-09,15 | |||
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| ||
|short_description=p4@CU688247,p4@CU689025,p4@CU689831,p4@CU689833,p4@CU689835,p4@CU691143 | |short_description=p4@CU688247,p4@CU689025,p4@CU689831,p4@CU689833,p4@CU689835,p4@CU691143 | ||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p4@CU688247, p4@CU689025, p4@CU689831, p4@CU689833, p4@CU689835, p4@CU691143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU688247_5end, CAGE_peak_4_at_CU689025_5end, CAGE_peak_4_at_CU689831_5end, CAGE_peak_4_at_CU689833_5end, CAGE_peak_4_at_CU689835_5end, CAGE_peak_4_at_CU691143_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 101bp_to_CU688247, CU689025, CU689831, CU689833, CU689835, CU691143_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.42e-51 | 14 |
lymphocyte of B lineage | 6.55e-49 | 24 |
pro-B cell | 6.55e-49 | 24 |
lymphoid lineage restricted progenitor cell | 2.26e-20 | 52 |
lymphocyte | 6.54e-20 | 53 |
common lymphoid progenitor | 6.54e-20 | 53 |
mature B cell | 1.15e-09 | 2 |
pre-B-II cell | 1.15e-09 | 2 |
transitional stage B cell | 1.15e-09 | 2 |
small pre-B-II cell | 1.15e-09 | 2 |
immature B cell | 1.15e-09 | 2 |
nongranular leukocyte | 5.09e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.09e-23 | 114 |
blood | 2.49e-09 | 15 |
haemolymphatic fluid | 2.49e-09 | 15 |
organism substance | 2.49e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.95e-10 | 10 |