FFCP PHASE1:Hg19::chr2:91777916..91777918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=380bp_to_ENST00000443031_5end | |association_with_transcript=380bp_to_ENST00000443031_5end | ||
|cluster_id=chr2:91777916..91777918,+ | |||
|coexpression_cluster_id=C984 | |||
|description=CAGE_peak_1_at_ENST00000443031_5end | |description=CAGE_peak_1_at_ENST00000443031_5end | ||
|id=chr2:91777916..91777918,+ | |id=chr2:91777916..91777918,+ | ||
|ontology_enrichment_celltype=CL:0000197!8.56e-11!6;CL:0000098!8.56e-11!6;CL:0002167!8.56e-11!6;CL:0002588!1.16e-08!2;CL:0000075!7.73e-08!27 | |ontology_enrichment_celltype=CL:0000197!8.56e-11!6;CL:0000098!8.56e-11!6;CL:0002167!8.56e-11!6;CL:0002588!1.16e-08!2;CL:0000075!7.73e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0000197;8.25e-16;6!CL:0000098;8.25e-16;6!CL:0002167;8.25e-16;6!CL:0002588;2.77e-12;2!CL:0002539;1.46e-09;10!CL:0002541;3.41e-09;3!CL:0000134;7.71e-09;55!CL:0000228;3.11e-07;1!CL:0002372;3.11e-07;1!CL:0000737;6.79e-07;4!CL:0000723;6.88e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,7.49e-16,6;CL:0000098,7.49e-16,6;CL:0002167,7.49e-16,6;CL:0002588,2.62e-12,2;CL:0002539,1.46e-09,10;CL:0002541,3.34e-09,3;CL:0000228,3.21e-07,1;CL:0002372,3.21e-07,1;CL:0000187,4.35e-07,55;CL:0000737,7.00e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.20e-09!14;DOID:120!4.60e-08!27;DOID:193!2.04e-07!29 | |ontology_enrichment_disease=DOID:2394!1.20e-09!14;DOID:120!4.60e-08!27;DOID:193!2.04e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.28e-14;14!DOID:120;7.95e-10;27!DOID:193;4.34e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.36e-14,14;DOID:120,8.07e-10,27;DOID:193,4.40e-09,29 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.43e-10;10!UBERON:0000158;7.43e-10;10!UBERON:0004237;1.46e-09;10!UBERON:0004695;1.46e-09;10!UBERON:0002111;1.46e-09;10!UBERON:0004178;1.46e-09;10!UBERON:0003124;3.41e-09;3!UBERON:0000920;3.41e-09;3!UBERON:0000992;2.33e-07;13!UBERON:0000947;7.38e-07;21!UBERON:0010191;7.38e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.46e-09,10;UBERON:0004695,1.46e-09,10;UBERON:0002111,1.46e-09,10;UBERON:0004178,1.46e-09,10;UBERON:0000920,3.34e-09,3;UBERON:0000992,2.52e-07,13;UBERON:0005631,4.45e-07,14;UBERON:0000158,4.45e-07,14;UBERON:0000947,7.52e-07,21;UBERON:0010191,7.52e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7572023432284,6.02694528023977,2.92124036154949,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28816602508123,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5927344650575,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,13.33333024706,0,0.504867548488229,0,10.6686397500416,0,0,0,0,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.115930404975077,15.9675824160717,0,0,0.951270761172991,0,0,0,0,0,0,5.03946384596579,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70547620162874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95144636908534,4.10386674233472,3.78485796081443,7.02848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.7516454288634,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1903178123646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62357900818653,0,0,0,1.43411352204052,3.63521451748548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7435018131961,2.96964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.0651565638091,6.50342913153222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89811221596536,0,0,0,0,0,3.14862178514523,0,1.24411862352257,0,7.82617592717601,0,5.71207818253193,0,0,0,18.0973166352613,3.18476710958893,0,8.92828833475262,7.74523824161614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89392132762208,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7572023432284,6.02694528023977,2.92124036154949,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28816602508123,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5927344650575,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,13.33333024706,0,0.504867548488229,0,10.6686397500416,0,0,0,0,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.115930404975077,15.9675824160717,0,0,0.951270761172991,0,0,0,0,0,0,5.03946384596579,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70547620162874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95144636908534,4.10386674233472,3.78485796081443,7.02848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.7516454288634,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1903178123646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62357900818653,0,0,0,1.43411352204052,3.63521451748548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7435018131961,2.96964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.0651565638091,6.50342913153222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89811221596536,0,0,0,0,0,3.14862178514523,0,1.24411862352257,0,7.82617592717601,0,5.71207818253193,0,0,0,18.0973166352613,3.18476710958893,0,8.92828833475262,7.74523824161614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89392132762208,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000443031 | |short_description=p1@ENST00000443031 | ||
}} | }} |
Latest revision as of 13:07, 29 July 2015
Short description: | p1@ENST00000443031 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000443031_5end |
Coexpression cluster: | C984_chorionic_Preadipocyte_Fibroblast_mesenchymal_Lens_amniotic_Myoblast |
Association with transcript: | 380bp_to_ENST00000443031_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ENST00000443031 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 7.49e-16 | 6 |
sensory epithelial cell | 7.49e-16 | 6 |
olfactory epithelial cell | 7.49e-16 | 6 |
smooth muscle cell of the umbilical vein | 2.62e-12 | 2 |
aortic smooth muscle cell | 1.46e-09 | 10 |
chorionic membrane mesenchymal stem cell | 3.34e-09 | 3 |
multinucleate cell | 3.21e-07 | 1 |
myotube | 3.21e-07 | 1 |
muscle cell | 4.35e-07 | 55 |
striated muscle cell | 7.00e-07 | 4 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 1.46e-09 | 10 |
arterial system smooth muscle | 1.46e-09 | 10 |
artery smooth muscle tissue | 1.46e-09 | 10 |
aorta smooth muscle tissue | 1.46e-09 | 10 |
egg chorion | 3.34e-09 | 3 |
female gonad | 2.52e-07 | 13 |
extraembryonic membrane | 4.45e-07 | 14 |
membranous layer | 4.45e-07 | 14 |
aorta | 7.52e-07 | 21 |
aortic system | 7.52e-07 | 21 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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ovarian cancer | 1.36e-14 | 14 |
female reproductive organ cancer | 8.07e-10 | 27 |
reproductive organ cancer | 4.40e-09 | 29 |
Showing 1 to 3 of 3 entries