FFCP PHASE1:Hg19::chr2:9987083..9987089,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:9987083..9987089,+ | |||
|description=CAGE_peak_at_chr2:9987083..9987089,+ | |description=CAGE_peak_at_chr2:9987083..9987089,+ | ||
|id=chr2:9987083..9987089,+ | |id=chr2:9987083..9987089,+ | ||
|ontology_enrichment_celltype=CL:0002202!2.91e-10!9;CL:0002632!2.91e-10!9;CL:0002368!9.40e-10!13;CL:0002097!1.44e-08!2;CL:0000066!2.98e-07!254 | |ontology_enrichment_celltype=CL:0002202!2.91e-10!9;CL:0002632!2.91e-10!9;CL:0002368!9.40e-10!13;CL:0002097!1.44e-08!2;CL:0000066!2.98e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.98e-38;3!CL:0002327;3.92e-29;4!CL:0000307;7.78e-11;3!CL:0000349;6.29e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.19e-38,3;CL:0002327,3.16e-29,4;CL:0000068,8.17e-11,3;CL:0000069,8.17e-11,3;CL:0000307,8.17e-11,3;CL:0000377,8.17e-11,3;CL:0000349,6.77e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000377;7.78e-11;3 | |||
|ontology_enrichment_disease=DOID:1749!1.72e-11!14;DOID:305!3.07e-08!106;DOID:162!2.54e-07!235;DOID:14566!5.03e-07!239 | |ontology_enrichment_disease=DOID:1749!1.72e-11!14;DOID:305!3.07e-08!106;DOID:162!2.54e-07!235;DOID:14566!5.03e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!4.02e-09!51 | |ontology_enrichment_uberon=UBERON:0005157!4.02e-09!51 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.98e-38;3!UBERON:0000920;1.98e-38;3!UBERON:0001911;3.92e-29;4!UBERON:0005631;2.58e-12;10!UBERON:0000158;2.58e-12;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.19e-38,3;UBERON:0001911,3.16e-29,4;UBERON:0005333,3.16e-29,4;UBERON:0008425,3.16e-29,4;UBERON:0005311,3.16e-29,4;UBERON:0003124,4.73e-17,7;UBERON:0000076,3.53e-15,8;UBERON:0005631,4.95e-09,14;UBERON:0000158,4.95e-09,14 | |||
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| ||
|short_description=p@chr2:9987083..9987089,+ | |short_description=p@chr2:9987083..9987089,+ | ||
}} | }} |
Latest revision as of 13:34, 29 July 2015
Short description: | p@chr2:9987083..9987089, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:9987083..9987089, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.19e-38 | 3 |
mammary gland epithelial cell | 3.16e-29 | 4 |
duct epithelial cell | 8.17e-11 | 3 |
branched duct epithelial cell | 8.17e-11 | 3 |
tracheal epithelial cell | 8.17e-11 | 3 |
tracheoblast | 8.17e-11 | 3 |
extraembryonic cell | 6.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.19e-38 | 3 |
mammary gland | 3.16e-29 | 4 |
mammary bud | 3.16e-29 | 4 |
mammary ridge | 3.16e-29 | 4 |
mammary placode | 3.16e-29 | 4 |
chorion | 4.73e-17 | 7 |
external ectoderm | 3.53e-15 | 8 |
extraembryonic membrane | 4.95e-09 | 14 |
membranous layer | 4.95e-09 | 14 |