FFCP PHASE1:Hg19::chr3:100557118..100557130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:100557118..100557130,- | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_at_chr3:100557118..100557130,- | |description=CAGE_peak_at_chr3:100557118..100557130,- | ||
|id=chr3:100557118..100557130,- | |id=chr3:100557118..100557130,- | ||
|ontology_enrichment_celltype=CL:0000057!4.40e-08!75;CL:0000055!5.02e-07!180 | |ontology_enrichment_celltype=CL:0000057!4.40e-08!75;CL:0000055!5.02e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.89e-12;6!CL:0000098;1.89e-12;6!CL:0002167;1.89e-12;6!CL:0000153;1.17e-08;9!CL:0000447;1.17e-08;9!CL:0000214;2.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.66e-12,6;CL:0000098,1.66e-12,6;CL:0002167,1.66e-12,6;CL:0000153,1.16e-08,9;CL:0000447,1.16e-08,9;CL:0000214,2.22e-07,3;CL:0000135,9.33e-07,3;CL:0000388,9.33e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.25e-07;3!UBERON:0007616;2.25e-07;3!UBERON:0002217;2.25e-07;3!UBERON:0002018;2.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.22e-07,3;UBERON:0007616,2.22e-07,3;UBERON:0002217,2.22e-07,3;UBERON:0002018,2.22e-07,3;UBERON:0007846,9.33e-07,3;UBERON:0000043,9.33e-07,3;UBERON:0007845,9.33e-07,3 | |||
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| ||
|short_description=p@chr3:100557118..100557130,- | |short_description=p@chr3:100557118..100557130,- | ||
}} | }} |
Latest revision as of 13:40, 29 July 2015
Short description: | p@chr3:100557118..100557130, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100557118..100557130, - |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.66e-12 | 6 |
sensory epithelial cell | 1.66e-12 | 6 |
olfactory epithelial cell | 1.66e-12 | 6 |
GAG secreting cell | 1.16e-08 | 9 |
carbohydrate secreting cell | 1.16e-08 | 9 |
synovial cell | 2.22e-07 | 3 |
fibrocyte | 9.33e-07 | 3 |
tendon cell | 9.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.22e-07 | 3 |
layer of synovial tissue | 2.22e-07 | 3 |
synovial joint | 2.22e-07 | 3 |
synovial membrane of synovial joint | 2.22e-07 | 3 |
dense regular connective tissue | 9.33e-07 | 3 |
tendon | 9.33e-07 | 3 |
regular connective tissue | 9.33e-07 | 3 |