FFCP PHASE1:Hg19::chr3:104628780..104628799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:104628780..104628799,- | |||
|description=CAGE_peak_at_chr3:104628780..104628799,- | |description=CAGE_peak_at_chr3:104628780..104628799,- | ||
|id=chr3:104628780..104628799,- | |id=chr3:104628780..104628799,- | ||
|ontology_enrichment_celltype=CL:0002139;8.21e-31;24!CL:0000071;1.61e-29;18!CL:0000115;6.29e-21;36!CL:1000413;2.37e-18;9!CL:0002543;5.65e-13;6!CL:0002078;6.90e-13;45!CL:0002544;1.03e-12;6!CL:0000213;2.70e-12;58!CL:0000215;2.70e-12;58!CL:0000076;1.24e-07;63!CL:0002573;2.58e-07;2!CL:0000515;2.58e-07;3 | |ontology_enrichment_celltype=CL:0002139!8.06e-22!24;CL:0000222!1.34e-21!119;CL:0000071!1.70e-17!18;CL:0002546!1.70e-17!18;CL:0000680!1.08e-14!57;CL:0000056!1.08e-14!57;CL:0000355!1.08e-14!57;CL:0000115!6.17e-14!35;CL:0000183!2.66e-13!59;CL:0000187!3.66e-12!54;CL:0000055!4.20e-12!180;CL:0000192!2.35e-10!42;CL:0000514!2.35e-10!42;CL:0000393!4.44e-10!60;CL:0000211!4.44e-10!60;CL:1000413!8.79e-10!9;CL:0002078!1.25e-09!44;CL:0000359!2.55e-09!32;CL:0002543!1.74e-08!6;CL:0000213!2.30e-08!57;CL:0000215!2.30e-08!57;CL:0000723!1.51e-07!436;CL:0000048!2.77e-07!430;CL:0002371!2.84e-07!591;CL:0000034!5.97e-07!444 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;8.21e-31;24!CL:0000071;1.61e-29;18!CL:0000115;6.29e-21;36!CL:1000413;2.37e-18;9!CL:0002543;5.65e-13;6!CL:0002078;6.90e-13;45!CL:0002544;1.03e-12;6!CL:0000213;2.70e-12;58!CL:0000215;2.70e-12;58!CL:0000076;1.24e-07;63!CL:0002573;2.58e-07;2!CL:0000515;2.58e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-30,24;CL:0000071,2.08e-29,18;CL:0002546,2.08e-29,18;CL:0000115,9.65e-23,36;CL:1000413,3.45e-18,9;CL:0002078,1.42e-17,45;CL:0000213,3.87e-17,58;CL:0000215,3.87e-17,58;CL:0000222,9.70e-17,121;CL:0002543,4.16e-13,6;CL:0002544,8.51e-13,6;CL:0000076,9.58e-10,63;CL:0002321,2.62e-08,250;CL:0002573,3.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.61e-29;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;1.61e-29;18!UBERON:0001986;1.61e-29;18!UBERON:0004852;1.61e-29;18!UBERON:0000487;9.48e-24;22!UBERON:0006914;1.24e-20;25!UBERON:0003915;2.37e-18;9!UBERON:0004700;2.37e-18;9!UBERON:0001917;2.37e-18;9!UBERON:0000490;8.62e-15;33!UBERON:0007500;1.23e-10;56!UBERON:0001981;1.23e-10;56!UBERON:0004537;1.23e-10;56!UBERON:0001638;1.12e-08;9!UBERON:0003920;1.12e-08;9!UBERON:0004582;1.12e-08;9!UBERON:0000055;5.63e-08;65 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.91e-22!69;UBERON:0002049!7.93e-20!79;UBERON:0007798!7.93e-20!79;UBERON:0001981!1.88e-18!60;UBERON:0007500!1.88e-18!60;UBERON:0004537!1.88e-18!60;UBERON:0006965!1.88e-18!60;UBERON:0001986!1.70e-17!18;UBERON:0004638!1.70e-17!18;UBERON:0004852!1.70e-17!18;UBERON:0000914!2.61e-16!83;UBERON:0002329!2.61e-16!83;UBERON:0003077!2.61e-16!83;UBERON:0003059!2.61e-16!83;UBERON:0007282!2.61e-16!83;UBERON:0009618!2.61e-16!83;UBERON:0007285!2.61e-16!83;UBERON:0004290!3.29e-16!70;UBERON:0001637!1.63e-15!42;UBERON:0003509!1.63e-15!42;UBERON:0004572!1.63e-15!42;UBERON:0000490!1.62e-14!138;UBERON:0004535!2.34e-13!110;UBERON:0000487!2.61e-13!22;UBERON:0004872!3.10e-13!84;UBERON:0001134!4.61e-13!61;UBERON:0002036!4.61e-13!61;UBERON:0003082!4.61e-13!61;UBERON:0001009!1.25e-12!113;UBERON:0002385!2.47e-12!63;UBERON:0001015!2.47e-12!63;UBERON:0000383!2.47e-12!63;UBERON:0000486!4.14e-12!82;UBERON:0006914!4.45e-11!25;UBERON:0004573!7.72e-10!33;UBERON:0004571!7.72e-10!33;UBERON:0003915!8.79e-10!9;UBERON:0004700!8.79e-10!9;UBERON:0001917!8.79e-10!9;UBERON:0003914!4.58e-09!118;UBERON:0005256!2.61e-08!143;UBERON:0002118!6.38e-07!5;UBERON:0004532!6.38e-07!5;UBERON:0000119!7.91e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.61e-29;18!UBERON:0001986;1.61e-29;18!UBERON:0004852;1.61e-29;18!UBERON:0000487;9.48e-24;22!UBERON:0006914;1.24e-20;25!UBERON:0003915;2.37e-18;9!UBERON:0004700;2.37e-18;9!UBERON:0001917;2.37e-18;9!UBERON:0000490;8.62e-15;33!UBERON:0007500;1.23e-10;56!UBERON:0001981;1.23e-10;56!UBERON:0004537;1.23e-10;56!UBERON:0001638;1.12e-08;9!UBERON:0003920;1.12e-08;9!UBERON:0004582;1.12e-08;9!UBERON:0000055;5.63e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.08e-29,18;UBERON:0001986,2.08e-29,18;UBERON:0004852,2.08e-29,18;UBERON:0000487,1.16e-23,22;UBERON:0006914,1.48e-20,25;UBERON:0003915,3.45e-18,9;UBERON:0004700,3.45e-18,9;UBERON:0001917,3.45e-18,9;UBERON:0000055,3.98e-14,68;UBERON:0007500,1.94e-12,59;UBERON:0001981,1.94e-12,59;UBERON:0004537,1.94e-12,59;UBERON:0006965,1.94e-12,59;UBERON:0002049,7.32e-12,78;UBERON:0007798,7.32e-12,78;UBERON:0004872,2.38e-09,83;UBERON:0000490,4.73e-09,148;UBERON:0001638,9.21e-09,9;UBERON:0003920,9.21e-09,9;UBERON:0004582,9.21e-09,9;UBERON:0004535,1.15e-08,109;UBERON:0001009,2.45e-08,112;UBERON:0001637,2.09e-07,42;UBERON:0003509,2.09e-07,42;UBERON:0004572,2.09e-07,42 | |||
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| ||
|short_description=p@chr3:104628780..104628799,- | |short_description=p@chr3:104628780..104628799,- | ||
}} | }} |
Latest revision as of 13:54, 29 July 2015
Short description: | p@chr3:104628780..104628799, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:104628780..104628799, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.03e-30 | 24 |
blood vessel endothelial cell | 2.08e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.08e-29 | 18 |
endothelial cell | 9.65e-23 | 36 |
endothelial cell of artery | 3.45e-18 | 9 |
meso-epithelial cell | 1.42e-17 | 45 |
lining cell | 3.87e-17 | 58 |
barrier cell | 3.87e-17 | 58 |
mesodermal cell | 9.70e-17 | 121 |
vein endothelial cell | 4.16e-13 | 6 |
aortic endothelial cell | 8.51e-13 | 6 |
squamous epithelial cell | 9.58e-10 | 63 |
embryonic cell | 2.62e-08 | 250 |
Schwann cell | 3.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.08e-29 | 18 |
endothelium | 2.08e-29 | 18 |
cardiovascular system endothelium | 2.08e-29 | 18 |
simple squamous epithelium | 1.16e-23 | 22 |
squamous epithelium | 1.48e-20 | 25 |
endothelial tube | 3.45e-18 | 9 |
arterial system endothelium | 3.45e-18 | 9 |
endothelium of artery | 3.45e-18 | 9 |
vessel | 3.98e-14 | 68 |
epithelial tube open at both ends | 1.94e-12 | 59 |
blood vessel | 1.94e-12 | 59 |
blood vasculature | 1.94e-12 | 59 |
vascular cord | 1.94e-12 | 59 |
vasculature | 7.32e-12 | 78 |
vascular system | 7.32e-12 | 78 |
splanchnic layer of lateral plate mesoderm | 2.38e-09 | 83 |
unilaminar epithelium | 4.73e-09 | 148 |
vein | 9.21e-09 | 9 |
venous blood vessel | 9.21e-09 | 9 |
venous system | 9.21e-09 | 9 |
cardiovascular system | 1.15e-08 | 109 |
circulatory system | 2.45e-08 | 112 |
artery | 2.09e-07 | 42 |
arterial blood vessel | 2.09e-07 | 42 |
arterial system | 2.09e-07 | 42 |