FFCP PHASE1:Hg19::chr3:106558890..106558921,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:106558890..106558921,- | |||
|description=CAGE_peak_at_chr3:106558890..106558921,- | |||
|id=chr3:106558890..106558921,- | |||
|ontology_enrichment_celltype=CL:0000188!1.02e-10!9;CL:0000055!9.47e-10!180;CL:1000306!2.27e-07!4;CL:0002547!2.27e-07!4;CL:0000243!4.37e-07!15;CL:0000125!4.37e-07!15;CL:0000030!4.37e-07!15;CL:0000339!4.37e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:1000306;2.12e-30;4!CL:0002547;2.12e-30;4!CL:0000243;1.21e-07;15!CL:0000125;1.21e-07;15!CL:0000095;6.84e-07;17!CL:0000188;7.00e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.87e-30,4;CL:0002547,2.87e-30,4;CL:0000243,1.11e-07,15;CL:0000125,1.11e-07,15;CL:0000030,1.11e-07,15;CL:0000339,1.11e-07,15;CL:0000095,6.37e-07,17;CL:0000123,6.37e-07,17;CL:0000188,6.79e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000339;1.21e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;1.94e-18;3!DOID:3093;5.67e-18;11!DOID:5662;6.21e-15;1!DOID:3369;1.84e-14;1!DOID:3571;1.84e-14;1!DOID:3350;7.03e-08;2!DOID:3193;7.03e-08;2!DOID:962;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.04e-18,3;DOID:3093,4.08e-18,11;DOID:5662,6.22e-15,1;DOID:3369,1.07e-14,1;DOID:3571,3.15e-14,1;DOID:3193,5.74e-08,2;DOID:962,5.74e-08,2;DOID:3350,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.05e-07!365;UBERON:0000415!2.27e-07!4;UBERON:0007240!2.27e-07!4;UBERON:0005742!2.27e-07!4;UBERON:0005734!2.27e-07!4;UBERON:0004664!2.27e-07!4;UBERON:0004663!2.27e-07!4;UBERON:0003296!6.55e-07!4;UBERON:0010133!6.55e-07!4;UBERON:0001905!7.27e-07!2;UBERON:0002757!7.27e-07!2;UBERON:0010134!7.27e-07!2;UBERON:0002784!7.27e-07!2;UBERON:0005408!7.27e-07!2;UBERON:0001899!7.27e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.12e-30;4!UBERON:0000415;2.12e-30;4!UBERON:0007240;2.12e-30;4!UBERON:0005742;2.12e-30;4!UBERON:0005734;2.12e-30;4!UBERON:0004664;2.12e-30;4!UBERON:0004663;2.12e-30;4!UBERON:0001134;3.83e-08;16!UBERON:0002036;3.83e-08;16!UBERON:0001905;7.03e-08;2!UBERON:0002757;7.03e-08;2!UBERON:0010134;7.03e-08;2!UBERON:0005408;7.03e-08;2!UBERON:0001899;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.87e-30,4;UBERON:0007240,2.87e-30,4;UBERON:0005742,2.87e-30,4;UBERON:0005734,2.87e-30,4;UBERON:0004664,2.87e-30,4;UBERON:0004663,2.87e-30,4;UBERON:0004797,1.31e-17,7;UBERON:0001905,6.15e-08,2;UBERON:0002757,6.15e-08,2;UBERON:0010134,6.15e-08,2;UBERON:0005408,6.15e-08,2;UBERON:0001899,6.15e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.13967460498122,7.94455084879313,1.14734648299525,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,1.16004861950546,0,0.15350367472613,0.413509717453592,0,0.290033387828457,0.767039646744908,9.97158799243458,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255605286265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,5.8438808611654,3.97490815986866,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,1.68141861109412,0,0.227662191351298,0,0,6.68803236805932,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.799072156691,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr3:106558890..106558921,- | |||
}} |
Latest revision as of 13:59, 29 July 2015
Short description: | p@chr3:106558890..106558921, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:106558890..106558921, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.87e-30 | 4 |
fibroblast of the aortic adventitia | 2.87e-30 | 4 |
glial cell (sensu Vertebrata) | 1.11e-07 | 15 |
glial cell | 1.11e-07 | 15 |
glioblast | 1.11e-07 | 15 |
glioblast (sensu Vertebrata) | 1.11e-07 | 15 |
neuron associated cell | 6.37e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.37e-07 | 17 |
cell of skeletal muscle | 6.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.87e-30 | 4 |
tunica adventitia of artery | 2.87e-30 | 4 |
adventitia | 2.87e-30 | 4 |
tunica adventitia of blood vessel | 2.87e-30 | 4 |
aorta tunica adventitia | 2.87e-30 | 4 |
aorta wall | 2.87e-30 | 4 |
blood vessel layer | 1.31e-17 | 7 |
pineal body | 6.15e-08 | 2 |
regional part of epithalamus | 6.15e-08 | 2 |
secretory circumventricular organ | 6.15e-08 | 2 |
circumventricular organ | 6.15e-08 | 2 |
epithalamus | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.04e-18 | 3 |
nervous system cancer | 4.08e-18 | 11 |
pleomorphic carcinoma | 6.22e-15 | 1 |
peripheral primitive neuroectodermal tumor | 1.07e-14 | 1 |
liver cancer | 3.15e-14 | 1 |
peripheral nerve sheath neoplasm | 5.74e-08 | 2 |
neurofibroma | 5.74e-08 | 2 |
mesenchymal cell neoplasm | 9.19e-08 | 2 |