FFCP PHASE1:Hg19::chr3:149106071..149106076,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:149106071..149106076,+ | |||
|description=CAGE_peak_at_chr3:149106071..149106076,+ | |description=CAGE_peak_at_chr3:149106071..149106076,+ | ||
|id=chr3:149106071..149106076,+ | |id=chr3:149106071..149106076,+ | ||
|ontology_enrichment_celltype=CL:0000134;3.63e-12;55!CL:0000048;4.60e-11;58!CL:0000723;1.59e-10;61!CL:0000034;6.94e-09;69!CL:0002541;1.18e-07;3!CL:0002582;8.54e-07;3!CL:0002620;9.92e-07;23 | |ontology_enrichment_celltype=CL:0000569!9.73e-08!4;CL:0000011!9.73e-08!4;CL:0002150!4.29e-07!3;CL:0000861!4.29e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000134;3.63e-12;55!CL:0000048;4.60e-11;58!CL:0000723;1.59e-10;61!CL:0000034;6.94e-09;69!CL:0002541;1.18e-07;3!CL:0002582;8.54e-07;3!CL:0002620;9.92e-07;23 | ||
|ontology_enrichment_disease=DOID:2394;1.82e-20;14!DOID:120;5.51e-10;27!DOID:193;3.30e-09;29 | |ontology_enrichment_celltype_v019_2=CL:0002541,1.14e-07,3;CL:0002582,9.34e-07,3;CL:0002620,9.56e-07,23 | ||
|ontology_enrichment_uberon=UBERON:0001737;2.08e-31;9!UBERON:0001557;2.08e-31;9!UBERON:0002118;1.94e-15;5!UBERON:0000992;1.33e-12;13!UBERON:0005631;6.72e-08;10!UBERON:0000158;6.72e-08;10!UBERON:0003124;1.18e-07;3!UBERON:0000920;1.18e-07;3!UBERON:0000991;1.48e-07;21 | |ontology_enrichment_development_v019=UBERON:0008947;6.91e-09;29 | ||
|ontology_enrichment_disease=DOID:2394!9.72e-18!14;DOID:120!1.14e-15!27;DOID:193!3.03e-14!29;DOID:305!4.43e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.82e-20;14!DOID:120;5.51e-10;27!DOID:193;3.30e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.05e-20,14;DOID:120,5.84e-10,27;DOID:193,3.48e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.65e-16!9;UBERON:0001557!1.81e-11!19;UBERON:0002118!3.82e-10!5;UBERON:0004532!3.82e-10!5;UBERON:0000992!1.29e-08!13;UBERON:0003134!2.10e-07!37;UBERON:0000474!2.10e-07!37;UBERON:0003100!3.10e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.08e-31;9!UBERON:0001557;2.08e-31;9!UBERON:0002118;1.94e-15;5!UBERON:0000992;1.33e-12;13!UBERON:0005631;6.72e-08;10!UBERON:0000158;6.72e-08;10!UBERON:0003124;1.18e-07;3!UBERON:0000920;1.18e-07;3!UBERON:0000991;1.48e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.26e-31,9;UBERON:0002118,2.57e-15,5;UBERON:0001557,2.54e-14,19;UBERON:0000992,1.52e-12,13;UBERON:0005631,2.32e-08,14;UBERON:0000158,2.32e-08,14;UBERON:0000920,1.14e-07,3;UBERON:0000991,1.60e-07,21;UBERON:0009196,1.60e-07,21;UBERON:0009117,1.60e-07,21;UBERON:0005564,1.60e-07,21;UBERON:0004176,3.76e-07,22;UBERON:0003124,9.14e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58891016975863,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0.741800787835671,0,0,0,0,0,0,0,0.751190294532984,0.226864366320042,5.202299434977,0,0,1.80054657650641,0,4.3798891807757,0,1.35021065793013,0,1.51460264546469,0,0,4.61512470271599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,1.8929088006375,3.03452442140583,0.241011029883482,2.31617342738027,1.52515610864684,1.89816495288877,2.29213223872279,2.15843611637881,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0.599837947092342,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.355123450626254,1.39616165223476,0,1.51073491997947,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,7.24068397710472,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0.876901770507525,0,0,0,0,0,0.286822704408103,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,1.67121139316383,0,4.60741053148848,0,0,0,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0,0,0,0,8.61303131276183,0,5.86338253620498,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0.0979923974143777,0.609414446062818,0,0,3.48322792640707,4.75080561060206,3.69519556739442,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,1.4405479798815,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.40227985908335,1.10961172300523,2.84104507912634,0.50313580350515,0,0.686520205190771,2.41969478021182,0.466311601748341,1.33069634990671,3.98241917909256,0,2.32894435314389,0.829412415681711,0.265841714557995,0.521745061811734,3.60618261593324,2.66563648518157,2.44122439922797,4.00067050245631,0.751873899297419,5.56840511854192,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,0,0.690359926060101,0,0,0,1.56302802246618,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,1.17400080465487,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58891016975863,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0.741800787835671,0,0,0,0,0,0,0,0.751190294532984,0.226864366320042,5.202299434977,0,0,1.80054657650641,0,4.3798891807757,0,1.35021065793013,0,1.51460264546469,0,0,4.61512470271599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,1.8929088006375,3.03452442140583,0.241011029883482,2.31617342738027,1.52515610864684,1.89816495288877,2.29213223872279,2.15843611637881,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0.599837947092342,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.355123450626254,1.39616165223476,0,1.51073491997947,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,7.24068397710472,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0.876901770507525,0,0,0,0,0,0.286822704408103,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,1.67121139316383,0,4.60741053148848,0,0,0,0,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0,0,0,0,8.61303131276183,0,5.86338253620498,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0.0979923974143777,0.609414446062818,0,0,3.48322792640707,4.75080561060206,3.69519556739442,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,1.4405479798815,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.40227985908335,1.10961172300523,2.84104507912634,0.50313580350515,0,0.686520205190771,2.41969478021182,0.466311601748341,1.33069634990671,3.98241917909256,0,2.32894435314389,0.829412415681711,0.265841714557995,0.521745061811734,3.60618261593324,2.66563648518157,2.44122439922797,4.00067050245631,0.751873899297419,5.56840511854192,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,0,0.690359926060101,0,0,0,1.56302802246618,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,1.17400080465487,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:149106071..149106076,+ | |short_description=p@chr3:149106071..149106076,+ | ||
}} | }} |
Latest revision as of 16:52, 29 July 2015
Short description: | p@chr3:149106071..149106076, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:149106071..149106076, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.14e-07 | 3 |
visceral preadipocyte | 9.34e-07 | 3 |
skin fibroblast | 9.56e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.26e-31 | 9 |
right ovary | 2.57e-15 | 5 |
upper respiratory tract | 2.54e-14 | 19 |
female gonad | 1.52e-12 | 13 |
extraembryonic membrane | 2.32e-08 | 14 |
membranous layer | 2.32e-08 | 14 |
egg chorion | 1.14e-07 | 3 |
gonad | 1.60e-07 | 21 |
indifferent external genitalia | 1.60e-07 | 21 |
indifferent gonad | 1.60e-07 | 21 |
gonad primordium | 1.60e-07 | 21 |
external genitalia | 3.76e-07 | 22 |
chorion | 9.14e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.05e-20 | 14 |
female reproductive organ cancer | 5.84e-10 | 27 |
reproductive organ cancer | 3.48e-09 | 29 |