FFCP PHASE1:Hg19::chr3:169312663..169312666,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:169312663..169312666,- | |||
|description=CAGE_peak_at_chr3:169312663..169312666,- | |description=CAGE_peak_at_chr3:169312663..169312666,- | ||
|id=chr3:169312663..169312666,- | |id=chr3:169312663..169312666,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;8.93e-20;1!CL:0002138;5.42e-13;6!CL:0000159;1.43e-10;2!CL:0002139;2.22e-07;24!CL:0002618;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,8.95e-20,1;CL:0005020,5.42e-13,6;CL:0002138,5.42e-13,6;CL:0005022,5.42e-13,6;CL:0000159,1.43e-10,2;CL:0002139,2.35e-07,24;CL:0002618,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.63e-19;4!UBERON:0007284;5.63e-19;4!CL:0005022;5.42e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;8.93e-20;1!DOID:3493;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.95e-20,1;DOID:3493,1.89e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!6.82e-07!3;UBERON:0004054!6.82e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.20e-25;3!UBERON:0000946;6.20e-25;3!UBERON:0002146;2.47e-19;1!UBERON:0002134;2.47e-19;1!UBERON:0005208;2.47e-19;1!UBERON:0005623;2.47e-19;1!UBERON:0004145;2.47e-19;1!UBERON:0005946;2.47e-19;1!UBERON:0005965;2.47e-19;1!UBERON:0002078;2.47e-19;1!UBERON:0002081;2.37e-10;2!UBERON:0002133;2.37e-10;2!UBERON:0001473;5.54e-10;8!UBERON:0004536;5.54e-10;8!UBERON:0006558;5.54e-10;8!UBERON:0010313;3.62e-08;10!UBERON:0002465;3.62e-08;10!UBERON:0004151;2.55e-07;3!UBERON:0002114;2.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.31e-25,3;UBERON:0009751,4.31e-25,3;UBERON:0000946,4.31e-25,3;UBERON:0002523,4.31e-25,3;UBERON:0005983,4.31e-25,3;UBERON:0002165,4.31e-25,3;UBERON:0002062,4.31e-25,3;UBERON:0007280,4.31e-25,3;UBERON:0002146,1.08e-19,1;UBERON:0005623,1.08e-19,1;UBERON:0002134,3.25e-19,1;UBERON:0005208,3.25e-19,1;UBERON:0005946,3.25e-19,1;UBERON:0005965,3.25e-19,1;UBERON:0002078,3.25e-19,1;UBERON:0004797,2.42e-11,7;UBERON:0002081,2.72e-10,2;UBERON:0002133,2.72e-10,2;UBERON:0010227,2.72e-10,2;UBERON:0001473,5.54e-10,8;UBERON:0004536,5.54e-10,8;UBERON:0006558,5.54e-10,8;UBERON:0010313,3.25e-08,10;UBERON:0002342,3.25e-08,10;UBERON:0005062,3.25e-08,10;UBERON:0002465,3.63e-08,10;UBERON:0002114,2.32e-07,2;UBERON:0004151,2.79e-07,3;UBERON:0004145,2.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.378139268656271,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,1.29208379584664,1.77883131343355,0.33472061276467,0,0,0,0,0,1.42879565254528,0.673588117878509,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0.653847612453835,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0.32681539055697,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0,0,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0.867798691675654,0,0.174118413160805,0.34945333648406,0,0.19351266257817,0,0.328461828212837,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0.72045208577053,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,1.83328339209347,1.43574604915363,0.399358000997982,0.429226048136571,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0.157611414598396,0.157363764404994,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21195617878347,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0.423387050190929,0,0,0,0.447421727191169,0,1.70685094975177,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0.0802413666891683,1.46067277649303,0,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0.426467963801962,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0.320182037633146,0,0,0,0,0.813792356631477,0,0,0 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| ||
|short_description=p@chr3:169312663..169312666,- | |short_description=p@chr3:169312663..169312666,- | ||
}} | }} |
Latest revision as of 18:03, 29 July 2015
Short description: | p@chr3:169312663..169312666, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:169312663..169312666, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 8.95e-20 | 1 |
lymphangioblast | 5.42e-13 | 6 |
endothelial cell of lymphatic vessel | 5.42e-13 | 6 |
vascular lymphangioblast | 5.42e-13 | 6 |
seromucus secreting cell | 1.43e-10 | 2 |
endothelial cell of vascular tree | 2.35e-07 | 24 |
endothelial cell of umbilical vein | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 4.31e-25 | 3 |
cardiac mesenchyme | 4.31e-25 | 3 |
cardial valve | 4.31e-25 | 3 |
tunica intima | 4.31e-25 | 3 |
heart layer | 4.31e-25 | 3 |
endocardium | 4.31e-25 | 3 |
endocardial cushion | 4.31e-25 | 3 |
presumptive endocardium | 4.31e-25 | 3 |
pulmonary valve | 1.08e-19 | 1 |
semi-lunar valve | 1.08e-19 | 1 |
tricuspid valve | 3.25e-19 | 1 |
right atrium valve | 3.25e-19 | 1 |
outflow tract of atrium | 3.25e-19 | 1 |
outflow part of right atrium | 3.25e-19 | 1 |
right cardiac atrium | 3.25e-19 | 1 |
blood vessel layer | 2.42e-11 | 7 |
cardiac atrium | 2.72e-10 | 2 |
atrioventricular valve | 2.72e-10 | 2 |
future cardiac atrium | 2.72e-10 | 2 |
lymphatic vessel | 5.54e-10 | 8 |
lymph vasculature | 5.54e-10 | 8 |
lymphatic part of lymphoid system | 5.54e-10 | 8 |
neural crest-derived structure | 3.25e-08 | 10 |
neural crest | 3.25e-08 | 10 |
neural fold | 3.25e-08 | 10 |
lymphoid system | 3.63e-08 | 10 |
duodenum | 2.32e-07 | 2 |
cardiac chamber | 2.79e-07 | 3 |
outflow tract | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.95e-20 | 1 |
signet ring cell adenocarcinoma | 1.89e-10 | 2 |