FFCP PHASE1:Hg19::chr3:169312663..169312666,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:169312663..169312666,- | |||
|description=CAGE_peak_at_chr3:169312663..169312666,- | |description=CAGE_peak_at_chr3:169312663..169312666,- | ||
|id=chr3:169312663..169312666,- | |id=chr3:169312663..169312666,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;8.93e-20;1!CL:0002138;5.42e-13;6!CL:0000159;1.43e-10;2!CL:0002139;2.22e-07;24!CL:0002618;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,8.95e-20,1;CL:0005020,5.42e-13,6;CL:0002138,5.42e-13,6;CL:0005022,5.42e-13,6;CL:0000159,1.43e-10,2;CL:0002139,2.35e-07,24;CL:0002618,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.63e-19;4!UBERON:0007284;5.63e-19;4!CL:0005022;5.42e-13;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;8.93e-20;1!DOID:3493;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.95e-20,1;DOID:3493,1.89e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!6.82e-07!3;UBERON:0004054!6.82e-07!3 | |ontology_enrichment_uberon=UBERON:0006947!6.82e-07!3;UBERON:0004054!6.82e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.20e-25;3!UBERON:0000946;6.20e-25;3!UBERON:0002146;2.47e-19;1!UBERON:0002134;2.47e-19;1!UBERON:0005208;2.47e-19;1!UBERON:0005623;2.47e-19;1!UBERON:0004145;2.47e-19;1!UBERON:0005946;2.47e-19;1!UBERON:0005965;2.47e-19;1!UBERON:0002078;2.47e-19;1!UBERON:0002081;2.37e-10;2!UBERON:0002133;2.37e-10;2!UBERON:0001473;5.54e-10;8!UBERON:0004536;5.54e-10;8!UBERON:0006558;5.54e-10;8!UBERON:0010313;3.62e-08;10!UBERON:0002465;3.62e-08;10!UBERON:0004151;2.55e-07;3!UBERON:0002114;2.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.31e-25,3;UBERON:0009751,4.31e-25,3;UBERON:0000946,4.31e-25,3;UBERON:0002523,4.31e-25,3;UBERON:0005983,4.31e-25,3;UBERON:0002165,4.31e-25,3;UBERON:0002062,4.31e-25,3;UBERON:0007280,4.31e-25,3;UBERON:0002146,1.08e-19,1;UBERON:0005623,1.08e-19,1;UBERON:0002134,3.25e-19,1;UBERON:0005208,3.25e-19,1;UBERON:0005946,3.25e-19,1;UBERON:0005965,3.25e-19,1;UBERON:0002078,3.25e-19,1;UBERON:0004797,2.42e-11,7;UBERON:0002081,2.72e-10,2;UBERON:0002133,2.72e-10,2;UBERON:0010227,2.72e-10,2;UBERON:0001473,5.54e-10,8;UBERON:0004536,5.54e-10,8;UBERON:0006558,5.54e-10,8;UBERON:0010313,3.25e-08,10;UBERON:0002342,3.25e-08,10;UBERON:0005062,3.25e-08,10;UBERON:0002465,3.63e-08,10;UBERON:0002114,2.32e-07,2;UBERON:0004151,2.79e-07,3;UBERON:0004145,2.79e-07,3 | |||
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| ||
|short_description=p@chr3:169312663..169312666,- | |short_description=p@chr3:169312663..169312666,- | ||
}} | }} |
Latest revision as of 18:03, 29 July 2015
Short description: | p@chr3:169312663..169312666, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:169312663..169312666, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 8.95e-20 | 1 |
lymphangioblast | 5.42e-13 | 6 |
endothelial cell of lymphatic vessel | 5.42e-13 | 6 |
vascular lymphangioblast | 5.42e-13 | 6 |
seromucus secreting cell | 1.43e-10 | 2 |
endothelial cell of vascular tree | 2.35e-07 | 24 |
endothelial cell of umbilical vein | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 4.31e-25 | 3 |
cardiac mesenchyme | 4.31e-25 | 3 |
cardial valve | 4.31e-25 | 3 |
tunica intima | 4.31e-25 | 3 |
heart layer | 4.31e-25 | 3 |
endocardium | 4.31e-25 | 3 |
endocardial cushion | 4.31e-25 | 3 |
presumptive endocardium | 4.31e-25 | 3 |
pulmonary valve | 1.08e-19 | 1 |
semi-lunar valve | 1.08e-19 | 1 |
tricuspid valve | 3.25e-19 | 1 |
right atrium valve | 3.25e-19 | 1 |
outflow tract of atrium | 3.25e-19 | 1 |
outflow part of right atrium | 3.25e-19 | 1 |
right cardiac atrium | 3.25e-19 | 1 |
blood vessel layer | 2.42e-11 | 7 |
cardiac atrium | 2.72e-10 | 2 |
atrioventricular valve | 2.72e-10 | 2 |
future cardiac atrium | 2.72e-10 | 2 |
lymphatic vessel | 5.54e-10 | 8 |
lymph vasculature | 5.54e-10 | 8 |
lymphatic part of lymphoid system | 5.54e-10 | 8 |
neural crest-derived structure | 3.25e-08 | 10 |
neural crest | 3.25e-08 | 10 |
neural fold | 3.25e-08 | 10 |
lymphoid system | 3.63e-08 | 10 |
duodenum | 2.32e-07 | 2 |
cardiac chamber | 2.79e-07 | 3 |
outflow tract | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.95e-20 | 1 |
signet ring cell adenocarcinoma | 1.89e-10 | 2 |