FFCP PHASE1:Hg19::chr3:186575441..186575452,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:186575441..186575452,+ | |||
|description=CAGE_peak_at_chr3:186575441..186575452,+ | |description=CAGE_peak_at_chr3:186575441..186575452,+ | ||
|id=chr3:186575441..186575452,+ | |id=chr3:186575441..186575452,+ | ||
|ontology_enrichment_celltype=CL:0000136!2.60e-30!15;CL:0002615!1.96e-22!3;CL:0000325!5.63e-11!39 | |ontology_enrichment_celltype=CL:0000136!2.60e-30!15;CL:0002615!1.96e-22!3;CL:0000325!5.63e-11!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.59e-67;13!CL:0002615;6.21e-25;3!CL:0002617;1.72e-10;2!CL:0002521;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.33e-58,15;CL:0002615,7.02e-25,3;CL:0002617,1.72e-10,2;CL:0002521,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.47e-19;1 | |||
|ontology_enrichment_disease=DOID:178!3.28e-08!1;DOID:326!3.28e-08!1;DOID:3978!3.28e-08!1;DOID:3394!3.28e-08!1;DOID:5844!3.28e-08!1 | |ontology_enrichment_disease=DOID:178!3.28e-08!1;DOID:326!3.28e-08!1;DOID:3978!3.28e-08!1;DOID:3394!3.28e-08!1;DOID:5844!3.28e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.67e-11!6;UBERON:0002358!1.67e-11!6;UBERON:0003684!1.67e-11!6;UBERON:0001178!1.67e-11!6;UBERON:0007023!4.66e-11!115;UBERON:0003978!8.26e-11!3;UBERON:0009751!8.26e-11!3;UBERON:0000946!8.26e-11!3;UBERON:0002523!8.26e-11!3;UBERON:0005983!8.26e-11!3;UBERON:0002165!8.26e-11!3;UBERON:0002062!8.26e-11!3;UBERON:0007280!8.26e-11!3;UBERON:0002146!5.59e-09!1;UBERON:0005623!5.59e-09!1;UBERON:0006122!6.03e-09!1;UBERON:0002079!9.46e-09!1;UBERON:0000989!1.27e-08!1;UBERON:0008811!1.27e-08!1;UBERON:0006258!1.27e-08!1;UBERON:0005876!1.27e-08!1;UBERON:0004874!1.27e-08!1;UBERON:0007029!1.37e-08!1;UBERON:0002135!1.71e-08!1;UBERON:0001831!1.84e-08!1;UBERON:0001567!1.84e-08!1;UBERON:0008801!1.84e-08!1;UBERON:0000029!1.98e-08!1;UBERON:0001301!3.79e-08!1 | |ontology_enrichment_uberon=UBERON:0003688!1.67e-11!6;UBERON:0002358!1.67e-11!6;UBERON:0003684!1.67e-11!6;UBERON:0001178!1.67e-11!6;UBERON:0007023!4.66e-11!115;UBERON:0003978!8.26e-11!3;UBERON:0009751!8.26e-11!3;UBERON:0000946!8.26e-11!3;UBERON:0002523!8.26e-11!3;UBERON:0005983!8.26e-11!3;UBERON:0002165!8.26e-11!3;UBERON:0002062!8.26e-11!3;UBERON:0007280!8.26e-11!3;UBERON:0002146!5.59e-09!1;UBERON:0005623!5.59e-09!1;UBERON:0006122!6.03e-09!1;UBERON:0002079!9.46e-09!1;UBERON:0000989!1.27e-08!1;UBERON:0008811!1.27e-08!1;UBERON:0006258!1.27e-08!1;UBERON:0005876!1.27e-08!1;UBERON:0004874!1.27e-08!1;UBERON:0007029!1.37e-08!1;UBERON:0002135!1.71e-08!1;UBERON:0001831!1.84e-08!1;UBERON:0001567!1.84e-08!1;UBERON:0008801!1.84e-08!1;UBERON:0000029!1.98e-08!1;UBERON:0001301!3.79e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;9.82e-20;1!UBERON:0005623;9.82e-20;1!UBERON:0002079;2.47e-19;1!UBERON:0003688;5.42e-13;6!UBERON:0002358;5.42e-13;6!UBERON:0003684;5.42e-13;6!UBERON:0001178;5.42e-13;6!UBERON:0002081;2.37e-10;2!UBERON:0004457;5.64e-09;9!UBERON:0000042;5.64e-09;9!UBERON:0000310;2.67e-08;10!UBERON:0001443;1.26e-07;11!UBERON:0003978;1.87e-07;3!UBERON:0000946;1.87e-07;3!UBERON:0004151;2.55e-07;3!UBERON:0002190;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,8.95e-20,1;UBERON:0005623,8.95e-20,1;UBERON:0002079,3.25e-19,1;UBERON:0003688,5.76e-13,6;UBERON:0002358,5.76e-13,6;UBERON:0003684,5.76e-13,6;UBERON:0001178,5.76e-13,6;UBERON:0002081,2.72e-10,2;UBERON:0010227,2.72e-10,2;UBERON:0000310,2.72e-08,10;UBERON:0001443,1.28e-07,11;UBERON:0003978,1.82e-07,3;UBERON:0009751,1.82e-07,3;UBERON:0000946,1.82e-07,3;UBERON:0002523,1.82e-07,3;UBERON:0005983,1.82e-07,3;UBERON:0002165,1.82e-07,3;UBERON:0002062,1.82e-07,3;UBERON:0007280,1.82e-07,3;UBERON:0002190,2.47e-07,3;UBERON:0004151,2.79e-07,3;UBERON:0004457,6.16e-07,12;UBERON:0000042,6.16e-07,12 | |||
|phase1_expression=0,3.63970890614671,0.281908808191942,2.00146596706261,2.68176656656373,0,0,0,2.35067065379855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,5.95817102430378,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,2.7575888342497,1.53172788381731,2.29510841496863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,3.63970890614671,0.281908808191942,2.00146596706261,2.68176656656373,0,0,0,2.35067065379855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,5.95817102430378,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,2.7575888342497,1.53172788381731,2.29510841496863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr3:186575441..186575452,+ | |short_description=p@chr3:186575441..186575452,+ | ||
}} | }} |
Latest revision as of 19:09, 29 July 2015
Short description: | p@chr3:186575441..186575452, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:186575441..186575452, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.33e-58 | 15 |
adipocyte of omentum tissue | 7.02e-25 | 3 |
adipocyte of breast | 1.72e-10 | 2 |
subcutaneous fat cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 8.95e-20 | 1 |
semi-lunar valve | 8.95e-20 | 1 |
left cardiac atrium | 3.25e-19 | 1 |
omentum | 5.76e-13 | 6 |
peritoneum | 5.76e-13 | 6 |
abdominal cavity | 5.76e-13 | 6 |
visceral peritoneum | 5.76e-13 | 6 |
cardiac atrium | 2.72e-10 | 2 |
future cardiac atrium | 2.72e-10 | 2 |
breast | 2.72e-08 | 10 |
chest | 1.28e-07 | 11 |
valve | 1.82e-07 | 3 |
cardiac mesenchyme | 1.82e-07 | 3 |
cardial valve | 1.82e-07 | 3 |
tunica intima | 1.82e-07 | 3 |
heart layer | 1.82e-07 | 3 |
endocardium | 1.82e-07 | 3 |
endocardial cushion | 1.82e-07 | 3 |
presumptive endocardium | 1.82e-07 | 3 |
subcutaneous adipose tissue | 2.47e-07 | 3 |
cardiac chamber | 2.79e-07 | 3 |
cavity lining | 6.16e-07 | 12 |
serous membrane | 6.16e-07 | 12 |