FFCP PHASE1:Hg19::chr3:32858508..32858525,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:32858508..32858525,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr3:32858508..32858525,+ | |description=CAGE_peak_at_chr3:32858508..32858525,+ | ||
|id=chr3:32858508..32858525,+ | |id=chr3:32858508..32858525,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.18e-46!5;CL:0000039!4.17e-45!7;CL:0000586!4.17e-45!7;CL:0000540!1.66e-14!6;CL:0000031!1.66e-14!6;CL:0000404!1.66e-14!6;CL:0000047!5.13e-11!8;CL:0000148!5.99e-09!10;CL:0000541!5.99e-09!10;CL:0000181!3.08e-07!12;CL:0000417!3.08e-07!12;CL:0000668!3.08e-07!12;CL:0000414!3.08e-07!12;CL:0000412!3.08e-07!12;CL:0000182!3.08e-07!12 | |ontology_enrichment_celltype=CL:0002322!1.18e-46!5;CL:0000039!4.17e-45!7;CL:0000586!4.17e-45!7;CL:0000540!1.66e-14!6;CL:0000031!1.66e-14!6;CL:0000404!1.66e-14!6;CL:0000047!5.13e-11!8;CL:0000148!5.99e-09!10;CL:0000541!5.99e-09!10;CL:0000181!3.08e-07!12;CL:0000417!3.08e-07!12;CL:0000668!3.08e-07!12;CL:0000414!3.08e-07!12;CL:0000412!3.08e-07!12;CL:0000182!3.08e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.91e-90;5!CL:0002321;3.09e-30;15!CL:0000540;1.69e-27;6!CL:0000404;1.69e-27;6!CL:0000148;7.90e-17;10!CL:0000147;3.25e-12;14!CL:0000710;9.87e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.49e-90,5;CL:0000540,1.76e-27,6;CL:0000031,1.76e-27,6;CL:0000404,1.76e-27,6;CL:0000047,8.30e-21,8;CL:0000148,7.29e-17,10;CL:0000541,7.29e-17,10;CL:0000147,3.07e-12,14;CL:0000133,1.73e-10,59;CL:0000710,9.48e-09,20;CL:0000221,1.29e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.69e-27;6 | |||
|ontology_enrichment_disease=DOID:3095!1.45e-31!22;DOID:2994!1.45e-31!22;DOID:0050687!4.78e-07!143;DOID:305!5.84e-07!106 | |ontology_enrichment_disease=DOID:3095!1.45e-31!22;DOID:2994!1.45e-31!22;DOID:0050687!4.78e-07!143;DOID:305!5.84e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!3.60e-18!8;UBERON:0003135!2.76e-13!11;UBERON:0000991!1.23e-10!21;UBERON:0009196!1.23e-10!21;UBERON:0009117!1.23e-10!21;UBERON:0005564!1.23e-10!21;UBERON:0004176!3.80e-10!22;UBERON:0003101!9.99e-07!22;UBERON:0000079!9.99e-07!22 | |ontology_enrichment_uberon=UBERON:0000473!3.60e-18!8;UBERON:0003135!2.76e-13!11;UBERON:0000991!1.23e-10!21;UBERON:0009196!1.23e-10!21;UBERON:0009117!1.23e-10!21;UBERON:0005564!1.23e-10!21;UBERON:0004176!3.80e-10!22;UBERON:0003101!9.99e-07!22;UBERON:0000079!9.99e-07!22 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr3:32858508..32858525,+ | |short_description=p@chr3:32858508..32858525,+ | ||
}} | }} |
Latest revision as of 20:28, 29 July 2015
Short description: | p@chr3:32858508..32858525, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:32858508..32858525, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.49e-90 | 5 |
neuron | 1.76e-27 | 6 |
neuroblast | 1.76e-27 | 6 |
electrically signaling cell | 1.76e-27 | 6 |
neuronal stem cell | 8.30e-21 | 8 |
melanocyte | 7.29e-17 | 10 |
melanoblast | 7.29e-17 | 10 |
pigment cell | 3.07e-12 | 14 |
neurectodermal cell | 1.73e-10 | 59 |
neurecto-epithelial cell | 9.48e-09 | 20 |
ectodermal cell | 1.29e-08 | 72 |