FFCP PHASE1:Hg19::chr3:52558504..52558511,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:52558504..52558511,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr3:52558504..52558511,- | |description=CAGE_peak_at_chr3:52558504..52558511,- | ||
|id=chr3:52558504..52558511,- | |id=chr3:52558504..52558511,- | ||
|ontology_enrichment_celltype=CL:0002194!3.02e-23!63;CL:0000576!3.02e-23!63;CL:0000040!3.02e-23!63;CL:0000559!3.02e-23!63;CL:0002009!2.34e-22!65;CL:0000839!2.34e-20!70;CL:0000557!5.44e-20!71;CL:0000766!2.65e-18!76;CL:0002057!3.05e-17!42;CL:0000860!7.90e-16!45;CL:0000763!2.58e-14!112;CL:0000049!2.58e-14!112;CL:0002087!5.06e-13!119;CL:0002619!3.45e-12!3;CL:0002031!3.96e-11!124;CL:0000738!3.87e-10!140;CL:0000037!1.29e-09!172;CL:0000566!1.29e-09!172;CL:0000988!1.52e-09!182;CL:0002032!2.08e-09!165;CL:0000837!2.08e-09!165;CL:0002545!2.92e-08!2 | |ontology_enrichment_celltype=CL:0002194!3.02e-23!63;CL:0000576!3.02e-23!63;CL:0000040!3.02e-23!63;CL:0000559!3.02e-23!63;CL:0002009!2.34e-22!65;CL:0000839!2.34e-20!70;CL:0000557!5.44e-20!71;CL:0000766!2.65e-18!76;CL:0002057!3.05e-17!42;CL:0000860!7.90e-16!45;CL:0000763!2.58e-14!112;CL:0000049!2.58e-14!112;CL:0002087!5.06e-13!119;CL:0002619!3.45e-12!3;CL:0002031!3.96e-11!124;CL:0000738!3.87e-10!140;CL:0000037!1.29e-09!172;CL:0000566!1.29e-09!172;CL:0000988!1.52e-09!182;CL:0002032!2.08e-09!165;CL:0000837!2.08e-09!165;CL:0002545!2.92e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.55e-98;3!CL:0002593;9.86e-18;2!CL:0002567;2.74e-12;3!CL:0000115;1.50e-08;36!CL:0002595;6.78e-08;5!CL:0000576;3.58e-07;48!CL:0000235;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.55e-98,3;CL:0002593,1.07e-17,2;CL:0002567,2.59e-12,3;CL:0002194,2.15e-09,59;CL:0000576,2.15e-09,59;CL:0000040,2.15e-09,59;CL:0000559,2.15e-09,59;CL:0002009,4.15e-09,61;CL:0000115,5.14e-09,36;CL:0000839,1.82e-08,66;CL:0000557,2.38e-08,67;CL:0002595,7.01e-08,5;CL:0000766,8.24e-08,72;CL:0002078,2.38e-07,45;CL:0000235,7.58e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.17e-17!80;UBERON:0001474!1.61e-15!86;UBERON:0002405!6.25e-15!115;UBERON:0002193!2.76e-14!112;UBERON:0002390!1.73e-13!102;UBERON:0003061!1.73e-13!102;UBERON:0004765!2.19e-12!101;UBERON:0001434!2.19e-12!101;UBERON:0005800!2.92e-08!2;UBERON:0001515!2.92e-08!2;UBERON:0003081!8.04e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;9.86e-18;2!UBERON:0003834;6.78e-08;5!UBERON:0001533;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.07e-17,2;UBERON:0003834,7.01e-08,5;UBERON:0001533,7.01e-08,5;UBERON:0002371,1.98e-07,76;UBERON:0001474,6.33e-07,82 | |||
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| ||
|short_description=p@chr3:52558504..52558511,- | |short_description=p@chr3:52558504..52558511,- | ||
}} | }} |
Latest revision as of 22:28, 29 July 2015
Short description: | p@chr3:52558504..52558511, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:52558504..52558511, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.55e-98 | 3 |
smooth muscle cell of the internal thoracic artery | 1.07e-17 | 2 |
light melanocyte | 2.59e-12 | 3 |
monopoietic cell | 2.15e-09 | 59 |
monocyte | 2.15e-09 | 59 |
monoblast | 2.15e-09 | 59 |
promonocyte | 2.15e-09 | 59 |
macrophage dendritic cell progenitor | 4.15e-09 | 61 |
endothelial cell | 5.14e-09 | 36 |
myeloid lineage restricted progenitor cell | 1.82e-08 | 66 |
granulocyte monocyte progenitor cell | 2.38e-08 | 67 |
smooth muscle cell of the subclavian artery | 7.01e-08 | 5 |
myeloid leukocyte | 8.24e-08 | 72 |
meso-epithelial cell | 2.38e-07 | 45 |
macrophage | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.07e-17 | 2 |
thoracic segment blood vessel | 7.01e-08 | 5 |
subclavian artery | 7.01e-08 | 5 |
bone marrow | 1.98e-07 | 76 |
bone element | 6.33e-07 | 82 |