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FFCP PHASE1:Hg19::chr3:98633389..98633415,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:98633389..98633415,+
|description=CAGE_peak_at_chr3:98633389..98633415,+
|description=CAGE_peak_at_chr3:98633389..98633415,+
|id=chr3:98633389..98633415,+
|id=chr3:98633389..98633415,+
|ontology_enrichment_celltype=CL:0000064!5.17e-18!3;CL:0005012!5.17e-18!3;CL:0000067!5.17e-18!3;CL:0002304!5.17e-18!3;CL:0000066!9.69e-12!254;CL:0000342!4.01e-07!1;CL:0002565!4.01e-07!1;CL:1001319!8.49e-07!1;CL:1000600!8.49e-07!1
|ontology_enrichment_celltype=CL:0000064!5.17e-18!3;CL:0005012!5.17e-18!3;CL:0000067!5.17e-18!3;CL:0002304!5.17e-18!3;CL:0000066!9.69e-12!254;CL:0000342!4.01e-07!1;CL:0002565!4.01e-07!1;CL:1001319!8.49e-07!1;CL:1000600!8.49e-07!1
|ontology_enrichment_celltype_v019=CL:1000415;1.33e-15;2!CL:0000306;2.03e-08;4!CL:0002222;2.03e-08;4!CL:0002224;2.03e-08;4
|ontology_enrichment_celltype_v019=CL:1000415;1.33e-15;2!CL:0000306;2.03e-08;4!CL:0002222;2.03e-08;4!CL:0002224;2.03e-08;4
|ontology_enrichment_celltype_v019_2=CL:1000415,1.33e-15,2;CL:0000306,1.96e-08,4;CL:0002222,1.96e-08,4;CL:0002224,1.96e-08,4
|ontology_enrichment_development_v019=UBERON:0009497;1.24e-09;13!UBERON:0001041;3.87e-09;30
|ontology_enrichment_development_v019=UBERON:0009497;1.24e-09;13!UBERON:0001041;3.87e-09;30
|ontology_enrichment_disease=DOID:305!3.75e-15!106;DOID:0050687!1.82e-11!143;DOID:7!4.50e-10!39;DOID:162!1.31e-09!235;DOID:14566!2.65e-09!239;DOID:3111!2.09e-07!1;DOID:3603!2.09e-07!1;DOID:0050619!4.51e-07!1;DOID:1357!4.51e-07!1;DOID:0060085!7.15e-07!1;DOID:3165!7.15e-07!1;DOID:0060121!7.15e-07!1;DOID:2438!7.15e-07!1;DOID:4418!7.15e-07!1;DOID:3112!8.02e-07!1
|ontology_enrichment_disease=DOID:305!3.75e-15!106;DOID:0050687!1.82e-11!143;DOID:7!4.50e-10!39;DOID:162!1.31e-09!235;DOID:14566!2.65e-09!239;DOID:3111!2.09e-07!1;DOID:3603!2.09e-07!1;DOID:0050619!4.51e-07!1;DOID:1357!4.51e-07!1;DOID:0060085!7.15e-07!1;DOID:3165!7.15e-07!1;DOID:0060121!7.15e-07!1;DOID:2438!7.15e-07!1;DOID:4418!7.15e-07!1;DOID:3112!8.02e-07!1
|ontology_enrichment_disease_v019=DOID:3111;7.48e-30;1!DOID:3603;7.48e-30;1!DOID:4929;1.66e-15;2
|ontology_enrichment_disease_v019=DOID:3111;7.48e-30;1!DOID:3603;7.48e-30;1!DOID:4929;1.66e-15;2
|ontology_enrichment_disease_v019_2=DOID:3111,7.48e-30,1;DOID:3603,7.48e-30,1;DOID:4929,1.78e-15,2;DOID:305,7.66e-10,106;DOID:0050687,2.48e-07,143
|ontology_enrichment_uberon=UBERON:0000488!2.07e-23!4;UBERON:0007625!2.63e-18!11;UBERON:0001778!5.17e-18!3;UBERON:0001775!5.17e-18!3;UBERON:0002203!1.14e-15!6;UBERON:0001768!1.14e-15!6;UBERON:0001801!2.90e-14!14;UBERON:0002394!5.59e-14!4;UBERON:0003928!5.59e-14!4;UBERON:0000019!7.63e-14!19;UBERON:0000047!7.63e-14!19;UBERON:0004088!7.63e-14!19;UBERON:0003072!7.63e-14!19;UBERON:0003071!7.63e-14!19;UBERON:0004128!7.63e-14!19;UBERON:0002294!7.66e-14!7;UBERON:0001173!7.66e-14!7;UBERON:0004912!7.66e-14!7;UBERON:0000970!4.16e-13!20;UBERON:0002104!1.93e-12!21;UBERON:0001456!1.93e-12!21;UBERON:0000020!2.80e-11!23;UBERON:0001032!9.01e-11!24;UBERON:0004456!9.01e-11!24;UBERON:0005911!5.63e-09!82;UBERON:0005085!9.29e-09!29;UBERON:0002200!1.36e-08!11;UBERON:0006876!1.36e-08!11;UBERON:0001048!3.86e-08!168;UBERON:0009497!9.16e-08!25;UBERON:0000015!9.16e-08!25;UBERON:0002423!9.16e-08!25;UBERON:0006235!9.16e-08!25;UBERON:0004161!9.16e-08!25;UBERON:0007499!1.13e-07!25;UBERON:0009856!2.35e-07!26;UBERON:0004913!2.50e-07!1;UBERON:0003703!2.50e-07!1;UBERON:0001174!2.50e-07!1;UBERON:0004914!2.50e-07!1;UBERON:0002506!4.01e-07!1;UBERON:0001769!4.01e-07!1;UBERON:0001764!4.51e-07!1;UBERON:0001825!4.51e-07!1;UBERON:0003929!5.90e-07!54;UBERON:0004645!8.49e-07!1;UBERON:0001256!8.49e-07!1;UBERON:0001259!8.49e-07!1
|ontology_enrichment_uberon=UBERON:0000488!2.07e-23!4;UBERON:0007625!2.63e-18!11;UBERON:0001778!5.17e-18!3;UBERON:0001775!5.17e-18!3;UBERON:0002203!1.14e-15!6;UBERON:0001768!1.14e-15!6;UBERON:0001801!2.90e-14!14;UBERON:0002394!5.59e-14!4;UBERON:0003928!5.59e-14!4;UBERON:0000019!7.63e-14!19;UBERON:0000047!7.63e-14!19;UBERON:0004088!7.63e-14!19;UBERON:0003072!7.63e-14!19;UBERON:0003071!7.63e-14!19;UBERON:0004128!7.63e-14!19;UBERON:0002294!7.66e-14!7;UBERON:0001173!7.66e-14!7;UBERON:0004912!7.66e-14!7;UBERON:0000970!4.16e-13!20;UBERON:0002104!1.93e-12!21;UBERON:0001456!1.93e-12!21;UBERON:0000020!2.80e-11!23;UBERON:0001032!9.01e-11!24;UBERON:0004456!9.01e-11!24;UBERON:0005911!5.63e-09!82;UBERON:0005085!9.29e-09!29;UBERON:0002200!1.36e-08!11;UBERON:0006876!1.36e-08!11;UBERON:0001048!3.86e-08!168;UBERON:0009497!9.16e-08!25;UBERON:0000015!9.16e-08!25;UBERON:0002423!9.16e-08!25;UBERON:0006235!9.16e-08!25;UBERON:0004161!9.16e-08!25;UBERON:0007499!1.13e-07!25;UBERON:0009856!2.35e-07!26;UBERON:0004913!2.50e-07!1;UBERON:0003703!2.50e-07!1;UBERON:0001174!2.50e-07!1;UBERON:0004914!2.50e-07!1;UBERON:0002506!4.01e-07!1;UBERON:0001769!4.01e-07!1;UBERON:0001764!4.51e-07!1;UBERON:0001825!4.51e-07!1;UBERON:0003929!5.90e-07!54;UBERON:0004645!8.49e-07!1;UBERON:0001256!8.49e-07!1;UBERON:0001259!8.49e-07!1
|ontology_enrichment_uberon_v019=UBERON:0002294;1.99e-64;7!UBERON:0001173;1.99e-64;7!UBERON:0002394;2.02e-63;4!UBERON:0003928;2.02e-63;4!UBERON:0004913;1.54e-29;1!UBERON:0003703;1.54e-29;1!UBERON:0001174;1.54e-29;1!UBERON:0004914;1.54e-29;1!UBERON:0000058;5.77e-26;10!UBERON:0002423;1.47e-18;25!UBERON:0002110;7.42e-11;3!UBERON:0002114;8.57e-11;2!UBERON:0010077;2.03e-08;4!UBERON:0005389;2.03e-08;4!UBERON:0000484;2.03e-08;4!UBERON:0000965;2.03e-08;4!UBERON:0001803;2.03e-08;4!UBERON:0002108;5.54e-07;4
|ontology_enrichment_uberon_v019=UBERON:0002294;1.99e-64;7!UBERON:0001173;1.99e-64;7!UBERON:0002394;2.02e-63;4!UBERON:0003928;2.02e-63;4!UBERON:0004913;1.54e-29;1!UBERON:0003703;1.54e-29;1!UBERON:0001174;1.54e-29;1!UBERON:0004914;1.54e-29;1!UBERON:0000058;5.77e-26;10!UBERON:0002423;1.47e-18;25!UBERON:0002110;7.42e-11;3!UBERON:0002114;8.57e-11;2!UBERON:0010077;2.03e-08;4!UBERON:0005389;2.03e-08;4!UBERON:0000484;2.03e-08;4!UBERON:0000965;2.03e-08;4!UBERON:0001803;2.03e-08;4!UBERON:0002108;5.54e-07;4
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|short_description=p@chr3:98633389..98633415,+
|short_description=p@chr3:98633389..98633415,+
}}
}}

Latest revision as of 00:09, 30 July 2015

Short description:p@chr3:98633389..98633415, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr3:98633389..98633415, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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