FFCP PHASE1:Hg19::chr4:11545581..11545588,+: Difference between revisions
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|id=chr4:11545581..11545588,+
|short_description=p@chr4:11545581..11545588,+
|description=CAGE_peak_at_chr4:11545581..11545588,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:11545581..11545588,+ | |||
|description=CAGE_peak_at_chr4:11545581..11545588,+ | |||
|id=chr4:11545581..11545588,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.72e-58!24;CL:0000071!6.40e-56!18;CL:0002546!6.40e-56!18;CL:0000115!5.40e-43!35;CL:0002078!8.15e-37!44;CL:1000413!1.96e-28!9;CL:0002544!1.39e-24!6;CL:0000213!2.02e-24!57;CL:0000215!2.02e-24!57;CL:0000076!1.01e-21!62;CL:0002543!7.05e-18!6;CL:0000222!3.84e-17!119;CL:0002618!1.68e-13!3;CL:0002144!5.51e-13!3;CL:0000066!1.12e-09!254;CL:0002545!2.86e-09!2;CL:0000220!1.82e-08!246;CL:0002321!2.42e-08!248;CL:0005020!7.72e-07!6;CL:0002138!7.72e-07!6;CL:0005022!7.72e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.17e-50;24!CL:0000071;4.42e-49;18!CL:0002543;2.20e-37;6!CL:0000115;5.00e-28;36!CL:0002078;7.01e-22;45!CL:0000213;1.93e-17;58!CL:0000215;1.93e-17;58!CL:0000076;2.67e-12;63!CL:1000413;6.16e-12;9!CL:0002144;1.14e-09;3!CL:0002618;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.18e-50,24;CL:0000071,4.61e-49,18;CL:0002546,4.61e-49,18;CL:0002543,1.72e-37,6;CL:0000115,1.66e-33,36;CL:0002078,7.51e-27,45;CL:0000213,7.15e-21,58;CL:0000215,7.15e-21,58;CL:0000076,3.07e-19,63;CL:1000413,6.88e-12,9;CL:0000222,5.00e-10,121;CL:0002144,1.19e-09,3;CL:0002618,1.41e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.42e-49;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.40e-56!18;UBERON:0004638!6.40e-56!18;UBERON:0004852!6.40e-56!18;UBERON:0000487!5.05e-45!22;UBERON:0006914!3.88e-39!25;UBERON:0000055!2.09e-31!69;UBERON:0002049!6.47e-29!79;UBERON:0007798!6.47e-29!79;UBERON:0003915!1.96e-28!9;UBERON:0004700!1.96e-28!9;UBERON:0001917!1.96e-28!9;UBERON:0001981!5.74e-28!60;UBERON:0007500!5.74e-28!60;UBERON:0004537!5.74e-28!60;UBERON:0006965!5.74e-28!60;UBERON:0004535!1.35e-22!110;UBERON:0004872!1.77e-22!84;UBERON:0001009!8.21e-22!113;UBERON:0003914!1.49e-20!118;UBERON:0000490!1.19e-13!138;UBERON:0001637!1.42e-13!42;UBERON:0003509!1.42e-13!42;UBERON:0004572!1.42e-13!42;UBERON:0001915!5.51e-13!3;UBERON:0001982!5.51e-13!3;UBERON:0001638!8.34e-12!9;UBERON:0003920!8.34e-12!9;UBERON:0004582!8.34e-12!9;UBERON:0000947!2.54e-11!21;UBERON:0010191!2.54e-11!21;UBERON:0000025!9.29e-11!194;UBERON:0004111!1.05e-10!241;UBERON:0004573!1.57e-10!33;UBERON:0004571!1.57e-10!33;UBERON:0000477!3.90e-10!286;UBERON:0005800!2.86e-09!2;UBERON:0001515!2.86e-09!2;UBERON:0003081!6.24e-09!216;UBERON:0002066!2.92e-08!5;UBERON:0000483!2.92e-07!309;UBERON:0000119!4.04e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.42e-49;18!UBERON:0001986;4.42e-49;18!UBERON:0004852;4.42e-49;18!UBERON:0000487;3.12e-40;22!UBERON:0006914;1.89e-35;25!UBERON:0001638;3.17e-25;9!UBERON:0003920;3.17e-25;9!UBERON:0004582;3.17e-25;9!UBERON:0000490;3.46e-25;33!UBERON:0003915;6.16e-12;9!UBERON:0004700;6.16e-12;9!UBERON:0001917;6.16e-12;9!UBERON:0007500;4.51e-10;56!UBERON:0001981;4.51e-10;56!UBERON:0004537;4.51e-10;56!UBERON:0010523;1.14e-09;3!UBERON:0001915;1.14e-09;3!UBERON:0001982;1.14e-09;3!UBERON:0000055;3.07e-09;65!UBERON:0003914;3.05e-07;74!UBERON:0002049;3.56e-07;75!UBERON:0007798;3.56e-07;75!UBERON:0001009;8.77e-07;112!UBERON:0004111;8.95e-07;130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.61e-49,18;UBERON:0001986,4.61e-49,18;UBERON:0004852,4.61e-49,18;UBERON:0000487,3.23e-40,22;UBERON:0006914,1.95e-35,25;UBERON:0001638,2.68e-25,9;UBERON:0003920,2.68e-25,9;UBERON:0004582,2.68e-25,9;UBERON:0000055,8.03e-18,68;UBERON:0002049,1.51e-15,78;UBERON:0007798,1.51e-15,78;UBERON:0007500,3.69e-15,59;UBERON:0001981,3.69e-15,59;UBERON:0004537,3.69e-15,59;UBERON:0006965,3.69e-15,59;UBERON:0003915,6.88e-12,9;UBERON:0004700,6.88e-12,9;UBERON:0001917,6.88e-12,9;UBERON:0004535,3.91e-11,109;UBERON:0001009,7.77e-11,112;UBERON:0004872,8.24e-11,83;UBERON:0010523,1.19e-09,3;UBERON:0001915,1.19e-09,3;UBERON:0001982,1.19e-09,3;UBERON:0003914,1.12e-07,117 | |||
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| ||
|short_description=p@chr4:11545581..11545588,+ | |||
}} | }} |
Latest revision as of 01:07, 30 July 2015
Short description: | p@chr4:11545581..11545588, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:11545581..11545588, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.18e-50 | 24 |
blood vessel endothelial cell | 4.61e-49 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.61e-49 | 18 |
vein endothelial cell | 1.72e-37 | 6 |
endothelial cell | 1.66e-33 | 36 |
meso-epithelial cell | 7.51e-27 | 45 |
lining cell | 7.15e-21 | 58 |
barrier cell | 7.15e-21 | 58 |
squamous epithelial cell | 3.07e-19 | 63 |
endothelial cell of artery | 6.88e-12 | 9 |
mesodermal cell | 5.00e-10 | 121 |
capillary endothelial cell | 1.19e-09 | 3 |
endothelial cell of umbilical vein | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.61e-49 | 18 |
endothelium | 4.61e-49 | 18 |
cardiovascular system endothelium | 4.61e-49 | 18 |
simple squamous epithelium | 3.23e-40 | 22 |
squamous epithelium | 1.95e-35 | 25 |
vein | 2.68e-25 | 9 |
venous blood vessel | 2.68e-25 | 9 |
venous system | 2.68e-25 | 9 |
vessel | 8.03e-18 | 68 |
vasculature | 1.51e-15 | 78 |
vascular system | 1.51e-15 | 78 |
epithelial tube open at both ends | 3.69e-15 | 59 |
blood vessel | 3.69e-15 | 59 |
blood vasculature | 3.69e-15 | 59 |
vascular cord | 3.69e-15 | 59 |
endothelial tube | 6.88e-12 | 9 |
arterial system endothelium | 6.88e-12 | 9 |
endothelium of artery | 6.88e-12 | 9 |
cardiovascular system | 3.91e-11 | 109 |
circulatory system | 7.77e-11 | 112 |
splanchnic layer of lateral plate mesoderm | 8.24e-11 | 83 |
microcirculatory vessel | 1.19e-09 | 3 |
endothelium of capillary | 1.19e-09 | 3 |
capillary | 1.19e-09 | 3 |
epithelial tube | 1.12e-07 | 117 |