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FFCP PHASE1:Hg19::chr4:125633260..125633270,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:125633260..125633270,-
|description=CAGE_peak_at_chr4:125633260..125633270,-
|description=CAGE_peak_at_chr4:125633260..125633270,-
|id=chr4:125633260..125633270,-
|id=chr4:125633260..125633270,-
|ontology_enrichment_celltype=CL:0000222!2.31e-16!119;CL:0000220!3.59e-14!246;CL:0002321!7.58e-14!248;CL:0000213!1.22e-11!57;CL:0000215!1.22e-11!57;CL:0002139!3.50e-11!24;CL:1000413!4.95e-11!9;CL:0000115!1.36e-10!35;CL:0002078!8.49e-10!44;CL:0000071!1.57e-09!18;CL:0002546!1.57e-09!18;CL:0000066!2.68e-08!254;CL:0002544!4.94e-08!6;CL:0002548!9.12e-08!6;CL:0000076!2.08e-07!62;CL:0000192!2.87e-07!42;CL:0000514!2.87e-07!42;CL:0000359!3.02e-07!32;CL:0000183!6.69e-07!59
|ontology_enrichment_celltype=CL:0000222!2.31e-16!119;CL:0000220!3.59e-14!246;CL:0002321!7.58e-14!248;CL:0000213!1.22e-11!57;CL:0000215!1.22e-11!57;CL:0002139!3.50e-11!24;CL:1000413!4.95e-11!9;CL:0000115!1.36e-10!35;CL:0002078!8.49e-10!44;CL:0000071!1.57e-09!18;CL:0002546!1.57e-09!18;CL:0000066!2.68e-08!254;CL:0002544!4.94e-08!6;CL:0002548!9.12e-08!6;CL:0000076!2.08e-07!62;CL:0000192!2.87e-07!42;CL:0000514!2.87e-07!42;CL:0000359!3.02e-07!32;CL:0000183!6.69e-07!59
|ontology_enrichment_celltype_v019=CL:0002548;2.79e-16;6!CL:0000071;5.38e-12;18!CL:1000413;3.96e-11;9!CL:0000115;1.91e-10;36!CL:0002544;7.47e-10;6!CL:0002139;7.47e-09;24!CL:0000213;8.08e-08;58!CL:0000215;8.08e-08;58!CL:0002078;1.24e-07;45
|ontology_enrichment_celltype_v019=CL:0002548;2.79e-16;6!CL:0000071;5.38e-12;18!CL:1000413;3.96e-11;9!CL:0000115;1.91e-10;36!CL:0002544;7.47e-10;6!CL:0002139;7.47e-09;24!CL:0000213;8.08e-08;58!CL:0000215;8.08e-08;58!CL:0002078;1.24e-07;45
|ontology_enrichment_celltype_v019_2=CL:0002548,3.43e-16,6;CL:0000115,1.52e-12,36;CL:0000071,3.33e-12,18;CL:0002546,3.33e-12,18;CL:1000413,2.10e-11,9;CL:0000213,7.71e-11,58;CL:0000215,7.71e-11,58;CL:0002544,4.21e-10,6;CL:0002078,9.73e-10,45;CL:0002139,5.27e-09,24;CL:0000222,4.47e-07,121
|ontology_enrichment_development_v019=CL:0002546;5.38e-12;18
|ontology_enrichment_development_v019=CL:0002546;5.38e-12;18
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:5093;8.25e-15;4!DOID:1612;8.25e-15;4
|ontology_enrichment_disease_v019=DOID:5093;8.25e-15;4!DOID:1612;8.25e-15;4
|ontology_enrichment_disease_v019_2=DOID:5093,1.45e-14,4;DOID:1612,1.45e-14,4
|ontology_enrichment_uberon=UBERON:0001637!8.03e-17!42;UBERON:0003509!8.03e-17!42;UBERON:0004572!8.03e-17!42;UBERON:0004872!1.48e-16!84;UBERON:0000055!9.83e-16!69;UBERON:0002049!2.15e-15!79;UBERON:0007798!2.15e-15!79;UBERON:0001981!3.05e-15!60;UBERON:0007500!3.05e-15!60;UBERON:0004537!3.05e-15!60;UBERON:0006965!3.05e-15!60;UBERON:0004535!2.67e-14!110;UBERON:0001009!1.74e-13!113;UBERON:0003914!4.62e-13!118;UBERON:0000490!7.25e-13!138;UBERON:0004573!4.13e-11!33;UBERON:0004571!4.13e-11!33;UBERON:0003915!4.95e-11!9;UBERON:0004700!4.95e-11!9;UBERON:0001917!4.95e-11!9;UBERON:0001986!1.57e-09!18;UBERON:0004638!1.57e-09!18;UBERON:0004852!1.57e-09!18;UBERON:0000947!5.12e-09!21;UBERON:0010191!5.12e-09!21;UBERON:0000483!6.76e-09!309;UBERON:0000119!1.40e-08!312;UBERON:0004111!1.01e-07!241;UBERON:0002100!1.20e-07!216;UBERON:0000025!4.05e-07!194;UBERON:0000487!4.66e-07!22
|ontology_enrichment_uberon=UBERON:0001637!8.03e-17!42;UBERON:0003509!8.03e-17!42;UBERON:0004572!8.03e-17!42;UBERON:0004872!1.48e-16!84;UBERON:0000055!9.83e-16!69;UBERON:0002049!2.15e-15!79;UBERON:0007798!2.15e-15!79;UBERON:0001981!3.05e-15!60;UBERON:0007500!3.05e-15!60;UBERON:0004537!3.05e-15!60;UBERON:0006965!3.05e-15!60;UBERON:0004535!2.67e-14!110;UBERON:0001009!1.74e-13!113;UBERON:0003914!4.62e-13!118;UBERON:0000490!7.25e-13!138;UBERON:0004573!4.13e-11!33;UBERON:0004571!4.13e-11!33;UBERON:0003915!4.95e-11!9;UBERON:0004700!4.95e-11!9;UBERON:0001917!4.95e-11!9;UBERON:0001986!1.57e-09!18;UBERON:0004638!1.57e-09!18;UBERON:0004852!1.57e-09!18;UBERON:0000947!5.12e-09!21;UBERON:0010191!5.12e-09!21;UBERON:0000483!6.76e-09!309;UBERON:0000119!1.40e-08!312;UBERON:0004111!1.01e-07!241;UBERON:0002100!1.20e-07!216;UBERON:0000025!4.05e-07!194;UBERON:0000487!4.66e-07!22
|ontology_enrichment_uberon_v019=UBERON:0004638;5.38e-12;18!UBERON:0001986;5.38e-12;18!UBERON:0004852;5.38e-12;18!UBERON:0003915;3.96e-11;9!UBERON:0004700;3.96e-11;9!UBERON:0001917;3.96e-11;9!UBERON:0000487;1.04e-09;22!UBERON:0006914;1.78e-08;25!UBERON:0000947;4.27e-07;21!UBERON:0010191;4.27e-07;21
|ontology_enrichment_uberon_v019=UBERON:0004638;5.38e-12;18!UBERON:0001986;5.38e-12;18!UBERON:0004852;5.38e-12;18!UBERON:0003915;3.96e-11;9!UBERON:0004700;3.96e-11;9!UBERON:0001917;3.96e-11;9!UBERON:0000487;1.04e-09;22!UBERON:0006914;1.78e-08;25!UBERON:0000947;4.27e-07;21!UBERON:0010191;4.27e-07;21
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.33e-12,18;UBERON:0001986,3.33e-12,18;UBERON:0004852,3.33e-12,18;UBERON:0004872,1.46e-11,83;UBERON:0003915,2.10e-11,9;UBERON:0004700,2.10e-11,9;UBERON:0001917,2.10e-11,9;UBERON:0003914,5.39e-10,117;UBERON:0000487,7.06e-10,22;UBERON:0007500,1.12e-08,59;UBERON:0001981,1.12e-08,59;UBERON:0004537,1.12e-08,59;UBERON:0006965,1.12e-08,59;UBERON:0006914,1.28e-08,25;UBERON:0004535,3.77e-08,109;UBERON:0001009,7.36e-08,112;UBERON:0000055,2.65e-07,68;UBERON:0000947,3.74e-07,21;UBERON:0010191,3.74e-07,21
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|short_description=p@chr4:125633260..125633270,-
|short_description=p@chr4:125633260..125633270,-
}}
}}

Latest revision as of 01:27, 30 July 2015

Short description:p@chr4:125633260..125633270, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr4:125633260..125633270, -
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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