FFCP PHASE1:Hg19::chr4:139210771..139210775,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:139210771..139210775,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr4:139210771..139210775,- | |description=CAGE_peak_at_chr4:139210771..139210775,- | ||
|id=chr4:139210771..139210775,- | |id=chr4:139210771..139210775,- | ||
|ontology_enrichment_celltype=CL:0000342!1.58e-07!1;CL:0002565!1.58e-07!1 | |ontology_enrichment_celltype=CL:0000342!1.58e-07!1;CL:0002565!1.58e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:3371!1.39e-07!1;DOID:4549!1.39e-07!1;DOID:5861!1.39e-07!1;DOID:6496!1.39e-07!1 | |ontology_enrichment_disease=DOID:3371!1.39e-07!1;DOID:4549!1.39e-07!1;DOID:5861!1.39e-07!1;DOID:6496!1.39e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005418!5.22e-08!1;UBERON:0001389!5.22e-08!1;UBERON:0000026!5.22e-08!1;UBERON:0008784!5.22e-08!1;UBERON:0006058!5.22e-08!1;UBERON:0003663!5.22e-08!1;UBERON:0001383!5.22e-08!1;UBERON:0004256!5.22e-08!1;UBERON:0002529!5.22e-08!1;UBERON:0004708!5.22e-08!1;UBERON:0002101!5.22e-08!1;UBERON:0004709!5.22e-08!1;UBERON:0003661!5.22e-08!1;UBERON:0002471!5.22e-08!1;UBERON:0004357!5.22e-08!1;UBERON:0009872!5.22e-08!1;UBERON:0004347!5.22e-08!1;UBERON:0005420!5.22e-08!1;UBERON:0005732!5.22e-08!1;UBERON:0006057!5.22e-08!1;UBERON:0000978!5.22e-08!1;UBERON:0002103!5.22e-08!1;UBERON:0001665!5.22e-08!1;UBERON:0003823!5.22e-08!1;UBERON:0000154!5.22e-08!1;UBERON:0005733!5.22e-08!1;UBERON:0005730!5.22e-08!1;UBERON:0001301!1.48e-07!1;UBERON:0002506!1.58e-07!1;UBERON:0001769!1.58e-07!1 | |ontology_enrichment_uberon=UBERON:0005418!5.22e-08!1;UBERON:0001389!5.22e-08!1;UBERON:0000026!5.22e-08!1;UBERON:0008784!5.22e-08!1;UBERON:0006058!5.22e-08!1;UBERON:0003663!5.22e-08!1;UBERON:0001383!5.22e-08!1;UBERON:0004256!5.22e-08!1;UBERON:0002529!5.22e-08!1;UBERON:0004708!5.22e-08!1;UBERON:0002101!5.22e-08!1;UBERON:0004709!5.22e-08!1;UBERON:0003661!5.22e-08!1;UBERON:0002471!5.22e-08!1;UBERON:0004357!5.22e-08!1;UBERON:0009872!5.22e-08!1;UBERON:0004347!5.22e-08!1;UBERON:0005420!5.22e-08!1;UBERON:0005732!5.22e-08!1;UBERON:0006057!5.22e-08!1;UBERON:0000978!5.22e-08!1;UBERON:0002103!5.22e-08!1;UBERON:0001665!5.22e-08!1;UBERON:0003823!5.22e-08!1;UBERON:0000154!5.22e-08!1;UBERON:0005733!5.22e-08!1;UBERON:0005730!5.22e-08!1;UBERON:0001301!1.48e-07!1;UBERON:0002506!1.58e-07!1;UBERON:0001769!1.58e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p@chr4:139210771..139210775,- | |short_description=p@chr4:139210771..139210775,- | ||
}} | }} |
Latest revision as of 01:41, 30 July 2015
Short description: | p@chr4:139210771..139210775, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:139210771..139210775, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |