FFCP PHASE1:Hg19::chr4:155490745..155490812,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:155490745..155490812,+ to FFCP PHASE1:Hg19::chr4:155490745..155490812,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:155490745..155490812,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr4:155490745..155490812,+ | |||
|id=chr4:155490745..155490812,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.55e-22!12;CL:0000417!2.55e-22!12;CL:0000668!2.55e-22!12;CL:0000414!2.55e-22!12;CL:0000412!2.55e-22!12;CL:0000182!2.55e-22!12;CL:0002602!1.06e-15!2;CL:0000223!3.90e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.87e-19;12!CL:0002563;2.04e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-19,12;CL:0002563,2.04e-07,4;CL:0000223,2.72e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.29e-10;11!UBERON:0009497;1.31e-08;13!CL:0000223;7.96e-07;58 | |||
|ontology_enrichment_disease=DOID:178!9.02e-09!1;DOID:326!9.02e-09!1;DOID:3978!9.02e-09!1;DOID:3394!9.02e-09!1;DOID:5844!9.02e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.37e-24!19;UBERON:0006925!1.37e-24!19;UBERON:0008836!1.37e-24!19;UBERON:0008835!4.32e-21!22;UBERON:0003894!4.32e-21!22;UBERON:0009854!3.98e-20!23;UBERON:0007499!1.98e-18!25;UBERON:0009497!1.98e-18!25;UBERON:0000015!1.98e-18!25;UBERON:0002423!1.98e-18!25;UBERON:0006235!1.98e-18!25;UBERON:0004161!1.98e-18!25;UBERON:0005057!1.11e-17!26;UBERON:0009856!1.11e-17!26;UBERON:0005172!1.85e-17!55;UBERON:0005173!1.85e-17!55;UBERON:0009568!1.06e-15!2;UBERON:0002216!1.06e-15!2;UBERON:0002209!1.06e-15!2;UBERON:0002213!1.06e-15!2;UBERON:0004267!1.06e-15!2;UBERON:0006444!1.06e-15!2;UBERON:0001995!1.06e-15!2;UBERON:0004715!1.06e-15!2;UBERON:0001468!1.06e-15!2;UBERON:0001130!1.06e-15!2;UBERON:0001066!1.06e-15!2;UBERON:0002417!1.57e-15!61;UBERON:0000916!1.57e-15!61;UBERON:0002365!1.19e-14!31;UBERON:0002330!1.19e-14!31;UBERON:0002368!7.54e-13!35;UBERON:0005177!7.84e-13!107;UBERON:0003929!1.92e-12!54;UBERON:0002418!8.90e-11!3;UBERON:0004755!8.90e-11!3;UBERON:0000949!9.58e-10!45;UBERON:0005911!2.97e-09!82;UBERON:0002530!4.51e-09!59;UBERON:0009569!8.85e-09!113;UBERON:0004921!2.15e-07!129;UBERON:0004185!2.15e-07!129;UBERON:0004905!8.41e-07!5;UBERON:0005174!8.41e-07!5;UBERON:0000982!8.41e-07!5;UBERON:0003586!8.41e-07!5;UBERON:0004770!8.41e-07!5;UBERON:0001137!8.41e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-33;19!UBERON:0006925;6.62e-33;19!UBERON:0002423;4.07e-25;25!UBERON:0002365;2.82e-20;31!UBERON:0002330;2.82e-20;31!UBERON:0002368;1.52e-17;33!UBERON:0000949;9.65e-13;43!UBERON:0005172;3.26e-09;52!UBERON:0005173;3.26e-09;52!UBERON:0001007;4.79e-09;81!UBERON:0001242;2.04e-07;4!UBERON:0001262;2.04e-07;4!UBERON:0004786;2.04e-07;4!UBERON:0004808;2.04e-07;4!UBERON:0001277;2.04e-07;4!UBERON:0002417;3.66e-07;58!UBERON:0000916;3.66e-07;58!UBERON:0002530;9.25e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0003929,1.15e-16,54;UBERON:0000949,4.14e-14,45;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0005911,5.08e-11,82;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0004921,1.33e-07,118;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4;UBERON:0001041,2.13e-07,87 | |||
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|short_description=p@chr4:155490745..155490812,+ | |||
}} | }} |
Latest revision as of 02:29, 30 July 2015
Short description: | p@chr4:155490745..155490812, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:155490745..155490812, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-19 | 12 |
intestinal epithelial cell | 2.04e-07 | 4 |
endodermal cell | 2.72e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine gland | 4.75e-18 | 35 |
gut epithelium | 1.15e-16 | 54 |
endocrine system | 4.14e-14 | 45 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
endo-epithelium | 5.08e-11 | 82 |
gland | 8.02e-11 | 59 |
abdominal segment of trunk | 1.20e-10 | 60 |
abdomen | 1.20e-10 | 60 |
subdivision of digestive tract | 1.33e-07 | 118 |
intestinal mucosa | 2.04e-07 | 4 |
wall of intestine | 2.04e-07 | 4 |
gastrointestinal system mucosa | 2.04e-07 | 4 |
gastrointestinal system epithelium | 2.04e-07 | 4 |
intestinal epithelium | 2.04e-07 | 4 |
foregut | 2.13e-07 | 87 |