FFCP PHASE1:Hg19::chr4:159330456..159330459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:159330456..159330459,+ | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_at_chr4:159330456..159330459,+ | |description=CAGE_peak_at_chr4:159330456..159330459,+ | ||
|id=chr4:159330456..159330459,+ | |id=chr4:159330456..159330459,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.40e-13!7;CL:0000586!1.40e-13!7;CL:1000415!1.48e-12!2 | |ontology_enrichment_celltype=CL:0000039!1.40e-13!7;CL:0000586!1.40e-13!7;CL:1000415!1.48e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;4.32e-26;2!CL:0000039;2.18e-08;7!CL:0000586;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,4.32e-26,2;CL:0000039,2.18e-08,7;CL:0000586,2.18e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!6.87e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.00e-13;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.00e-13,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.80e-25!8;UBERON:0003135!1.32e-18!11;UBERON:0000991!4.44e-10!21;UBERON:0009196!4.44e-10!21;UBERON:0009117!4.44e-10!21;UBERON:0005564!4.44e-10!21;UBERON:0004176!1.19e-09!22;UBERON:0003101!1.19e-09!22;UBERON:0000079!1.19e-09!22;UBERON:0002110!8.31e-09!3;UBERON:0006242!8.31e-09!3;UBERON:0002323!4.54e-08!46;UBERON:0004458!1.35e-07!49 | |ontology_enrichment_uberon=UBERON:0000473!2.80e-25!8;UBERON:0003135!1.32e-18!11;UBERON:0000991!4.44e-10!21;UBERON:0009196!4.44e-10!21;UBERON:0009117!4.44e-10!21;UBERON:0005564!4.44e-10!21;UBERON:0004176!1.19e-09!22;UBERON:0003101!1.19e-09!22;UBERON:0000079!1.19e-09!22;UBERON:0002110!8.31e-09!3;UBERON:0006242!8.31e-09!3;UBERON:0002323!4.54e-08!46;UBERON:0004458!1.35e-07!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;6.76e-18;3!UBERON:0002294;1.89e-08;7!UBERON:0001173;1.89e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,6.76e-18,3;UBERON:0006242,6.76e-18,3;UBERON:0002294,7.48e-07,9;UBERON:0001173,7.48e-07,9;UBERON:0004912,7.48e-07,9 | |||
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|short_description=p@chr4:159330456..159330459,+ | |short_description=p@chr4:159330456..159330459,+ | ||
}} | }} |
Latest revision as of 02:47, 30 July 2015
Short description: | p@chr4:159330456..159330459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:159330456..159330459, + |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 4.32e-26 | 2 |
germ line cell | 2.18e-08 | 7 |
germ cell | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 6.76e-18 | 3 |
gall bladder primordium | 6.76e-18 | 3 |
biliary system | 7.48e-07 | 9 |
biliary tree | 7.48e-07 | 9 |
biliary bud | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.00e-13 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |