FFCP PHASE1:Hg19::chr4:165798404..165798409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000510062_5end | |association_with_transcript=10bp_to_ENST00000510062_5end | ||
|cluster_id=chr4:165798404..165798409,+ | |||
|coexpression_cluster_id=C4390 | |||
|description=CAGE_peak_2_at_ENST00000510062_5end | |description=CAGE_peak_2_at_ENST00000510062_5end | ||
|id=chr4:165798404..165798409,+ | |id=chr4:165798404..165798409,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.16e-32!5;CL:0000540!3.27e-10!6;CL:0000031!3.27e-10!6;CL:0000404!3.27e-10!6;CL:0000817!2.23e-09!3;CL:0000945!1.01e-08!24;CL:0000826!1.01e-08!24;CL:0000047!9.04e-08!8;CL:0002563!1.35e-07!4;CL:0000946!1.91e-07!1;CL:0000786!1.91e-07!1;CL:0000980!1.91e-07!1;CL:0000313!2.04e-07!1 | |ontology_enrichment_celltype=CL:0002322!4.16e-32!5;CL:0000540!3.27e-10!6;CL:0000031!3.27e-10!6;CL:0000404!3.27e-10!6;CL:0000817!2.23e-09!3;CL:0000945!1.01e-08!24;CL:0000826!1.01e-08!24;CL:0000047!9.04e-08!8;CL:0002563!1.35e-07!4;CL:0000946!1.91e-07!1;CL:0000786!1.91e-07!1;CL:0000980!1.91e-07!1;CL:0000313!2.04e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.56e-26;2!CL:0002563;1.00e-13;4!CL:0000540;1.50e-09;6!CL:0000404;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.56e-26,2;CL:0002563,1.00e-13,4;CL:0000540,1.44e-09,6;CL:0000031,1.44e-09,6;CL:0000404,1.44e-09,6;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.50e-09;6!UBERON:0003104;1.19e-07;31 | |||
|ontology_enrichment_disease=DOID:178!1.30e-07!1;DOID:326!1.30e-07!1;DOID:3978!1.30e-07!1;DOID:3394!1.30e-07!1;DOID:5844!1.30e-07!1;DOID:2355!1.39e-07!1;DOID:2152!2.04e-07!1;DOID:1287!3.49e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.95e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.95e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.35e-07!4;UBERON:0001262!1.35e-07!4;UBERON:0004786!1.35e-07!4;UBERON:0004808!1.35e-07!4;UBERON:0001277!1.35e-07!4;UBERON:0004911!2.04e-07!1 | |ontology_enrichment_uberon=UBERON:0001242!1.35e-07!4;UBERON:0001262!1.35e-07!4;UBERON:0004786!1.35e-07!4;UBERON:0004808!1.35e-07!4;UBERON:0001277!1.35e-07!4;UBERON:0004911!2.04e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.00e-13;4!UBERON:0001242;1.00e-13;4!UBERON:0001262;1.00e-13;4!UBERON:0004786;1.00e-13;4!UBERON:0004808;1.00e-13;4!UBERON:0001277;1.00e-13;4!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0004907;2.94e-11;5!UBERON:0005409;1.02e-09;22!UBERON:0000485;2.03e-08;7!UBERON:0003929;2.03e-08;7!UBERON:0003350;1.59e-07;8!UBERON:0004921;3.37e-07;33!UBERON:0001155;7.91e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.00e-13,4;UBERON:0001242,1.00e-13,4;UBERON:0001262,1.00e-13,4;UBERON:0004786,1.00e-13,4;UBERON:0004808,1.00e-13,4;UBERON:0001277,1.00e-13,4;UBERON:0004907,2.94e-11,5;UBERON:0005409,1.03e-08,25;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0003350,1.59e-07,8;UBERON:0001155,7.91e-07,9;UBERON:0000485,7.91e-07,9 | |||
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|short_description=p2@ENST00000510062 | |short_description=p2@ENST00000510062 | ||
}} | }} |
Latest revision as of 03:00, 30 July 2015
Short description: | p2@ENST00000510062 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000510062_5end |
Coexpression cluster: | C4390_gastric_colon_hepatoblastoma_H9_iPS_Intestinal_heart |
Association with transcript: | 10bp_to_ENST00000510062_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.56e-26 | 2 |
intestinal epithelial cell | 1.00e-13 | 4 |
neuron | 1.44e-09 | 6 |
neuroblast | 1.44e-09 | 6 |
electrically signaling cell | 1.44e-09 | 6 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.00e-13 | 4 |
intestinal mucosa | 1.00e-13 | 4 |
wall of intestine | 1.00e-13 | 4 |
gastrointestinal system mucosa | 1.00e-13 | 4 |
gastrointestinal system epithelium | 1.00e-13 | 4 |
intestinal epithelium | 1.00e-13 | 4 |
lower digestive tract | 2.94e-11 | 5 |
gastrointestinal system | 1.03e-08 | 25 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
epithelium of mucosa | 1.59e-07 | 8 |
colon | 7.91e-07 | 9 |
simple columnar epithelium | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.95e-15 | 14 |