FFCP PHASE1:Hg19::chr4:169540045..169540056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:169540045..169540056,+ | |||
|description=CAGE_peak_at_chr4:169540045..169540056,+ | |description=CAGE_peak_at_chr4:169540045..169540056,+ | ||
|id=chr4:169540045..169540056,+ | |id=chr4:169540045..169540056,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.73e-24!180;CL:0000057!1.37e-14!75;CL:0000128!1.89e-13!7;CL:0000126!1.89e-13!7;CL:0000127!1.89e-13!7;CL:0002453!1.89e-13!7;CL:0002603!6.64e-09!3;CL:0000680!8.29e-09!57;CL:0000056!8.29e-09!57;CL:0000355!8.29e-09!57;CL:0002605!1.34e-08!3;CL:0000064!1.74e-08!3;CL:0005012!1.74e-08!3;CL:0000067!1.74e-08!3;CL:0002304!1.74e-08!3;CL:0000515!1.36e-07!4;CL:1000306!2.37e-07!4;CL:0002547!2.37e-07!4;CL:0002371!3.51e-07!591;CL:0002539!4.92e-07!10;CL:0000359!5.10e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.73e-24!180;CL:0000057!1.37e-14!75;CL:0000128!1.89e-13!7;CL:0000126!1.89e-13!7;CL:0000127!1.89e-13!7;CL:0002453!1.89e-13!7;CL:0002603!6.64e-09!3;CL:0000680!8.29e-09!57;CL:0000056!8.29e-09!57;CL:0000355!8.29e-09!57;CL:0002605!1.34e-08!3;CL:0000064!1.74e-08!3;CL:0005012!1.74e-08!3;CL:0000067!1.74e-08!3;CL:0002304!1.74e-08!3;CL:0000515!1.36e-07!4;CL:1000306!2.37e-07!4;CL:0002547!2.37e-07!4;CL:0002371!3.51e-07!591;CL:0002539!4.92e-07!10;CL:0000359!5.10e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000515;2.74e-34;3!CL:0000056;6.64e-26;4!CL:0002590;1.02e-15;3!CL:0000680;4.37e-15;7!CL:0002581;9.92e-13;1!CL:0000359;9.03e-09;32!CL:0002321;2.54e-07;15!CL:0000128;3.67e-07;7!CL:0000126;3.67e-07;7!CL:0000127;3.67e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,7.23e-26,4;CL:0002590,7.83e-16,3;CL:0002581,9.92e-13,1;CL:0000680,2.52e-11,58;CL:0000056,2.52e-11,58;CL:0000355,2.52e-11,58;CL:0000359,1.67e-08,32;CL:0000128,4.29e-07,7;CL:0000126,4.29e-07,7;CL:0000127,4.29e-07,7;CL:0002453,4.29e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000515;6.64e-26;4!CL:0000355;7.12e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.13e-10!83;UBERON:0002329!1.13e-10!83;UBERON:0003077!1.13e-10!83;UBERON:0003059!1.13e-10!83;UBERON:0007282!1.13e-10!83;UBERON:0009618!1.13e-10!83;UBERON:0007285!1.13e-10!83;UBERON:0002200!1.48e-08!11;UBERON:0006876!1.48e-08!11;UBERON:0001778!1.74e-08!3;UBERON:0001775!1.74e-08!3;UBERON:0001134!5.56e-08!61;UBERON:0002036!5.56e-08!61;UBERON:0003082!5.56e-08!61;UBERON:0002385!1.31e-07!63;UBERON:0001015!1.31e-07!63;UBERON:0000383!1.31e-07!63;UBERON:0000947!1.32e-07!21;UBERON:0010191!1.32e-07!21;UBERON:0004290!1.76e-07!70;UBERON:0000415!2.37e-07!4;UBERON:0007240!2.37e-07!4;UBERON:0005742!2.37e-07!4;UBERON:0005734!2.37e-07!4;UBERON:0004664!2.37e-07!4;UBERON:0004663!2.37e-07!4;UBERON:0005406!4.20e-07!2;UBERON:0001637!4.30e-07!42;UBERON:0003509!4.30e-07!42;UBERON:0004572!4.30e-07!42;UBERON:0004237!4.92e-07!10;UBERON:0004695!4.92e-07!10;UBERON:0002111!4.92e-07!10;UBERON:0004178!4.92e-07!10;UBERON:0002049!5.08e-07!79;UBERON:0007798!5.08e-07!79 | |ontology_enrichment_uberon=UBERON:0000914!1.13e-10!83;UBERON:0002329!1.13e-10!83;UBERON:0003077!1.13e-10!83;UBERON:0003059!1.13e-10!83;UBERON:0007282!1.13e-10!83;UBERON:0009618!1.13e-10!83;UBERON:0007285!1.13e-10!83;UBERON:0002200!1.48e-08!11;UBERON:0006876!1.48e-08!11;UBERON:0001778!1.74e-08!3;UBERON:0001775!1.74e-08!3;UBERON:0001134!5.56e-08!61;UBERON:0002036!5.56e-08!61;UBERON:0003082!5.56e-08!61;UBERON:0002385!1.31e-07!63;UBERON:0001015!1.31e-07!63;UBERON:0000383!1.31e-07!63;UBERON:0000947!1.32e-07!21;UBERON:0010191!1.32e-07!21;UBERON:0004290!1.76e-07!70;UBERON:0000415!2.37e-07!4;UBERON:0007240!2.37e-07!4;UBERON:0005742!2.37e-07!4;UBERON:0005734!2.37e-07!4;UBERON:0004664!2.37e-07!4;UBERON:0004663!2.37e-07!4;UBERON:0005406!4.20e-07!2;UBERON:0001637!4.30e-07!42;UBERON:0003509!4.30e-07!42;UBERON:0004572!4.30e-07!42;UBERON:0004237!4.92e-07!10;UBERON:0004695!4.92e-07!10;UBERON:0002111!4.92e-07!10;UBERON:0004178!4.92e-07!10;UBERON:0002049!5.08e-07!79;UBERON:0007798!5.08e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0005284;8.30e-10;5!UBERON:0002385;6.97e-09;31!UBERON:0001015;6.97e-09;31!UBERON:0000383;6.97e-09;31!UBERON:0005406;5.41e-07;2!UBERON:0001134;6.81e-07;16!UBERON:0002036;6.81e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.55e-10,62;UBERON:0002036,1.55e-10,62;UBERON:0003082,1.55e-10,62;UBERON:0002385,3.52e-10,64;UBERON:0001015,3.52e-10,64;UBERON:0000383,3.52e-10,64;UBERON:0005284,7.11e-10,5;UBERON:0002329,4.36e-09,71;UBERON:0003059,4.36e-09,71;UBERON:0007282,4.36e-09,71;UBERON:0004290,4.36e-09,71;UBERON:0009618,4.36e-09,71;UBERON:0003077,6.00e-09,72;UBERON:0007285,6.00e-09,72;UBERON:0007524,8.19e-09,73;UBERON:0007503,3.44e-08,78;UBERON:0000486,1.22e-07,83;UBERON:0005406,5.41e-07,2 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.369363174230364,1.22400414746552,0.313454721478088,0.286235987131057,0.136874425072884,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,6.48804985984772,0.860509862246441,0,0,2.1349799145941,0.49333509683432,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,1.5324389789951,0.150238058906597,0,0.717558542755448,0.213557388818567,0,0,0,0.515281080091258,0,0,0.0974370051611986,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,1.51183915378974,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87549826589899,0,0,5.50168965336801,1.43833425785268,6.26713371339634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,1.47495334833363,0,0,0,0,0,0,0,0,0,0.496215615637554,3.22270143904931,0,0,0,0.160853921143607,4.45254199334973,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.340906509664404,0,0,0,0.127612712494584,0,0,1.88887408098384,0,0,0,0,0,0.286249773483982,1.86079184679834,2.53103539774981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12678241012897,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.54503513781167,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.369363174230364,1.22400414746552,0.313454721478088,0.286235987131057,0.136874425072884,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,6.48804985984772,0.860509862246441,0,0,2.1349799145941,0.49333509683432,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,1.5324389789951,0.150238058906597,0,0.717558542755448,0.213557388818567,0,0,0,0.515281080091258,0,0,0.0974370051611986,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,1.51183915378974,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87549826589899,0,0,5.50168965336801,1.43833425785268,6.26713371339634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,1.47495334833363,0,0,0,0,0,0,0,0,0,0.496215615637554,3.22270143904931,0,0,0,0.160853921143607,4.45254199334973,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.340906509664404,0,0,0,0.127612712494584,0,0,1.88887408098384,0,0,0,0,0,0.286249773483982,1.86079184679834,2.53103539774981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12678241012897,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:169540045..169540056,+ | |short_description=p@chr4:169540045..169540056,+ | ||
}} | }} |
Latest revision as of 03:12, 30 July 2015
Short description: | p@chr4:169540045..169540056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:169540045..169540056, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 7.23e-26 | 4 |
smooth muscle cell of the brain vasculature | 7.83e-16 | 3 |
perirenal preadipocyte | 9.92e-13 | 1 |
muscle precursor cell | 2.52e-11 | 58 |
myoblast | 2.52e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.52e-11 | 58 |
vascular associated smooth muscle cell | 1.67e-08 | 32 |
oligodendrocyte | 4.29e-07 | 7 |
macroglial cell | 4.29e-07 | 7 |
astrocyte | 4.29e-07 | 7 |
oligodendrocyte precursor cell | 4.29e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.55e-10 | 62 |
striated muscle tissue | 1.55e-10 | 62 |
myotome | 1.55e-10 | 62 |
muscle tissue | 3.52e-10 | 64 |
musculature | 3.52e-10 | 64 |
musculature of body | 3.52e-10 | 64 |
brain vasculature | 7.11e-10 | 5 |
somite | 4.36e-09 | 71 |
presomitic mesoderm | 4.36e-09 | 71 |
presumptive segmental plate | 4.36e-09 | 71 |
dermomyotome | 4.36e-09 | 71 |
trunk paraxial mesoderm | 4.36e-09 | 71 |
paraxial mesoderm | 6.00e-09 | 72 |
presumptive paraxial mesoderm | 6.00e-09 | 72 |
dense mesenchyme tissue | 8.19e-09 | 73 |
epithelial vesicle | 3.44e-08 | 78 |
multilaminar epithelium | 1.22e-07 | 83 |
perirenal fat | 5.41e-07 | 2 |