FFCP PHASE1:Hg19::chr4:187496739..187496741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:187496739..187496741,- | |||
|description=CAGE_peak_at_chr4:187496739..187496741,- | |description=CAGE_peak_at_chr4:187496739..187496741,- | ||
|id=chr4:187496739..187496741,- | |id=chr4:187496739..187496741,- | ||
|ontology_enrichment_celltype=CL:0000222;3.98e-14;1!CL:0002097;1.81e-07;2 | |ontology_enrichment_celltype=CL:0000066!1.14e-09!254;CL:0000223!1.49e-09!59;CL:0002076!3.53e-08!43 | ||
| | |ontology_enrichment_celltype_v019=CL:0000222;3.98e-14;1!CL:0002097;1.81e-07;2 | ||
|ontology_enrichment_disease=DOID:3151;3.28e-14;1!DOID:3149;3.28e-14;1!DOID:1749;1.42e-08;14!DOID:3451;9.55e-08;2!DOID:4159;9.55e-08;2!DOID:0060122;9.55e-08;2!DOID:3910;9.55e-08;2!DOID:4929;1.81e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0002097,1.64e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0000997;5.15e-14;1!UBERON:0005056;5.15e-14;1!UBERON:0004176;5.15e-14;1!UBERON:0004913;1.18e-13;1!UBERON:0003703;1.18e-13;1!UBERON:0001174;1.18e-13;1!UBERON:0004914;1.18e-13;1!UBERON:0002394;2.84e-13;4!UBERON:0003928;2.84e-13;4!UBERON:0000058;7.67e-12;10!UBERON:0002294;5.66e-08;7!UBERON:0001173;5.66e-08;7!UBERON:0004903;9.55e-08;2!UBERON:0002173;9.55e-08;2!UBERON:0002186;9.55e-08;2!UBERON:0006562;1.81e-07;2 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.53e-20!235;DOID:14566!5.89e-20!239;DOID:0050687!5.12e-19!143;DOID:305!8.19e-16!106;DOID:0050686!7.67e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.28e-14;1!DOID:3149;3.28e-14;1!DOID:1749;1.42e-08;14!DOID:3451;9.55e-08;2!DOID:4159;9.55e-08;2!DOID:0060122;9.55e-08;2!DOID:3910;9.55e-08;2!DOID:4929;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.08e-14,1;DOID:3149,3.08e-14,1;DOID:1749,1.49e-08,14;DOID:305,1.90e-08,106;DOID:3451,9.25e-08,2;DOID:4159,9.25e-08,2;DOID:0060122,9.25e-08,2;DOID:3910,9.87e-08,2;DOID:4929,1.75e-07,2;DOID:0050687,1.81e-07,143;DOID:162,2.89e-07,235;DOID:14566,4.45e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.15e-14;1!UBERON:0005056;5.15e-14;1!UBERON:0004176;5.15e-14;1!UBERON:0004913;1.18e-13;1!UBERON:0003703;1.18e-13;1!UBERON:0001174;1.18e-13;1!UBERON:0004914;1.18e-13;1!UBERON:0002394;2.84e-13;4!UBERON:0003928;2.84e-13;4!UBERON:0000058;7.67e-12;10!UBERON:0002294;5.66e-08;7!UBERON:0001173;5.66e-08;7!UBERON:0004903;9.55e-08;2!UBERON:0002173;9.55e-08;2!UBERON:0002186;9.55e-08;2!UBERON:0006562;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.85e-14,1;UBERON:0005056,5.85e-14,1;UBERON:0004913,1.10e-13,1;UBERON:0003703,1.10e-13,1;UBERON:0001174,1.10e-13,1;UBERON:0004914,1.10e-13,1;UBERON:0002394,4.03e-09,6;UBERON:0003928,4.03e-09,6;UBERON:0004903,9.87e-08,2;UBERON:0002173,9.87e-08,2;UBERON:0002186,9.87e-08,2 | |||
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| ||
|short_description=p@chr4:187496739..187496741,- | |short_description=p@chr4:187496739..187496741,- | ||
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Latest revision as of 04:09, 30 July 2015
Short description: | p@chr4:187496739..187496741, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:187496739..187496741, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.85e-14 | 1 |
external female genitalia | 5.85e-14 | 1 |
hepatopancreatic ampulla | 1.10e-13 | 1 |
extrahepatic bile duct | 1.10e-13 | 1 |
common bile duct | 1.10e-13 | 1 |
duodenal papilla | 1.10e-13 | 1 |
bile duct | 4.03e-09 | 6 |
digestive system duct | 4.03e-09 | 6 |
bronchoalveolar duct junction | 9.87e-08 | 2 |
alveolar duct | 9.87e-08 | 2 |
bronchiole | 9.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.08e-14 | 1 |
keratoacanthoma | 3.08e-14 | 1 |
squamous cell carcinoma | 1.49e-08 | 14 |
carcinoma | 1.90e-08 | 106 |
skin carcinoma | 9.25e-08 | 2 |
skin cancer | 9.25e-08 | 2 |
integumentary system cancer | 9.25e-08 | 2 |
lung adenocarcinoma | 9.87e-08 | 2 |
tubular adenocarcinoma | 1.75e-07 | 2 |
cell type cancer | 1.81e-07 | 143 |
cancer | 2.89e-07 | 235 |
disease of cellular proliferation | 4.45e-07 | 239 |