FFCP PHASE1:Hg19::chr4:52917466..52917498,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:52917466..52917498,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr4:52917466..52917498,- | |description=CAGE_peak_at_chr4:52917466..52917498,- | ||
|id=chr4:52917466..52917498,- | |id=chr4:52917466..52917498,- | ||
|ontology_enrichment_celltype=CL:0002231!3.94e-08!3 | |ontology_enrichment_celltype=CL:0002231!3.94e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002363;4.66e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,4.66e-21,2;CL:0000008,4.66e-21,2 | |||
|ontology_enrichment_development_v019=CL:0000008;4.66e-21;2!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!6.24e-07!1;UBERON:0001018!6.24e-07!1;UBERON:0002473!6.24e-07!1;UBERON:0005340!6.24e-07!1;UBERON:0002316!6.24e-07!1;UBERON:0003544!6.24e-07!1;UBERON:0001020!6.24e-07!1;UBERON:0005970!6.24e-07!1;UBERON:0002437!6.24e-07!1;UBERON:0000473!7.16e-07!8 | |ontology_enrichment_uberon=UBERON:0002336!6.24e-07!1;UBERON:0001018!6.24e-07!1;UBERON:0002473!6.24e-07!1;UBERON:0005340!6.24e-07!1;UBERON:0002316!6.24e-07!1;UBERON:0003544!6.24e-07!1;UBERON:0001020!6.24e-07!1;UBERON:0005970!6.24e-07!1;UBERON:0002437!6.24e-07!1;UBERON:0000473!7.16e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;4.66e-21;2!UBERON:0001777;4.66e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0003891;3.10e-11;4!UBERON:0000964;3.10e-11;4!UBERON:0010409;3.10e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,4.66e-21,2;UBERON:0001777,4.66e-21,2;UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0003891,3.10e-11,4;UBERON:0000964,3.10e-11,4;UBERON:0010409,3.10e-11,4;UBERON:0004348,3.10e-11,4;UBERON:0005427,3.10e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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|short_description=p@chr4:52917466..52917498,- | |short_description=p@chr4:52917466..52917498,- | ||
}} | }} |
Latest revision as of 05:35, 30 July 2015
Short description: | p@chr4:52917466..52917498, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:52917466..52917498, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 4.66e-21 | 2 |
migratory cranial neural crest cell | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 4.66e-21 | 2 |
substantia propria of cornea | 4.66e-21 | 2 |
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
stroma | 3.10e-11 | 4 |
cornea | 3.10e-11 | 4 |
eye surface | 3.10e-11 | 4 |
optic eminence | 3.10e-11 | 4 |
corneal primordium | 3.10e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |